RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CCT7Q99832 543 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 SPATC1LQ9H0A9 340 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 KCNQ5Q9NR82 932 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 AP4E1Q9UPM8 1137 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 MYH6P13533 1939 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 RTN3O95197 1032 aaPredicted RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CD44P16070 742 aaKnown RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 BTKQ06187 659 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 EPC2Q52LR7 807 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 KRT78Q8N1N4 520 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CARNMT1Q8N4J0 409 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 RXFP2Q8WXD0 754 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 COPS7BQ9H9Q2 264 aaPredicted RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 IL1RL2Q9HB29 575 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 PCDH9Q9HC56 1237 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 NMRK2Q9NPI5 230 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CXCL11O14625 94 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 STRNO43815 780 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 TPBGLP0DKB5 382 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ACADSP16219 412 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CCR1P32246 355 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 OTUD4Q01804 1114 aaKnown RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 KRR1Q13601 381 aaKnown RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 SPOCD1Q6ZMY3 1216 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 KIAA2013Q8IYS2 634 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ACER1Q8TDN7 264 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 IARS2Q9NSE4 1012 aaKnown RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 PCDHB12Q9Y5F1 795 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ATP5BP06576 529 aaKnown RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CALB2P22676 271 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CASP4P49662 377 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CCNG1P51959 295 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 DSG1Q02413 1049 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CTXN3Q4LDR2 81 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 NOA1Q8NC60 698 aaKnown RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 FBXO36Q8NEA4 188 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CAVIN3Q969G5 261 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 VTA1Q9NP79 307 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 VANGL2Q9ULK5 521 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 E7ENQ6 273 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 M0R3G1 203 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 PLEKP08567 350 aaPredicted RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 TCN1P20061 433 aaPredicted RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 SOX6P35712 828 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 AVPR1AP37288 418 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CLCN3P51790 818 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 FBXO47Q5MNV8 452 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ERAP2Q6P179 960 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 C11orf96Q7Z7L8 435 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF410Q86VK4 478 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ATP8B4Q8TF62 1192 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 SOCS4Q8WXH5 440 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 SH3GL3Q99963 347 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CBWD1Q9BRT8 395 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 DDX28Q9NUL7 540 aaKnown RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 NDUFA13Q9P0J0 144 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 TMCC3Q9ULS5 477 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 E2F8A0AVK6 867 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 HACD1B0YJ81 288 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 FAM47E-STBD1D6RA91 191 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 PLA2G6O60733 806 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 MICAL2O94851 1124 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 IFNA14P01570 189 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 DSG3P32926 999 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CAPZA2P47755 286 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 PEX5P50542 639 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 PTPN11Q06124 597 aaPredicted RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 MPP3Q13368 585 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF268Q14587 947 aaPredicted RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ANKS6Q68DC2 871 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF280DQ6N043 979 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 PRMT9Q6P2P2 845 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ARID3BQ8IVW6 561 aaPredicted RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 COLGALT1Q8NBJ5 622 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CNBD2Q96M20 576 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ADAM33Q9BZ11 813 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 PRRG3Q9BZD7 231 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 EPS8L2Q9H6S3 715 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 FCGR1AP12314 374 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 CYP2F1P24903 491 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 CRABP2P29373 138 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 CHRNB3Q05901 458 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 KIAA1683Q9H0B3 1180 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 CTNNAL1Q9UBT7 734 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 VTI1BQ9UEU0 232 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TRHDEQ9UKU6 1024 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ADAMTS13Q76LX8 1427 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 PRR23D1E9PI22 279 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TK2O00142 265 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 O00370 1275 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 PRR23D2P0DMB1 279 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SLC12A3P55017 1021 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 PTENP60484 403 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 HERVK_113P62684 666 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 PGM5Q15124 567 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TRIP4Q15650 581 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 CYP51A1Q16850 503 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 CCDC60Q8IWA6 550 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 FBXO16Q8IX29 292 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 LZTR1Q8N653 840 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms