RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 ANAPC1Q9H1A4 1944 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 VCANP13611 3396 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 HHLA1C9JL84 531 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 GOLGA8SH3BPF8 625 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 DLL1O00548 723 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 PAPLNO95428 1278 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 CALCAP01258 141 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 CYP1A2P05177 515 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 CFHP08603 1231 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 USP17L7P0C7H9 530 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 SLC2A3P11169 496 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 SDC4P31431 198 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 NOS2P35228 1153 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 TAF10Q12962 218 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 TCEAL1Q15170 157 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 PUS10Q3MIT2 529 aaKnown RBP10.71□□□□□ -0.69
CLPB-210ENST00000539148 ACBD5Q5T8D3 534 aaPredicted RBP10.71□□□□□ -0.69
CLPB-210ENST00000539148 SNX30Q5VWJ9 437 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 PLEKHA7Q6IQ23 1121 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 CCDC70Q6NSX1 233 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 ANKRD54Q6NXT1 300 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 DDX42Q86XP3 938 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLPB-210ENST00000539148 XYLT1Q86Y38 959 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 TTC9BQ8N6N2 239 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 FNIP1Q8TF40 1166 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 RUBCNQ92622 972 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 FAM161BQ96MY7 647 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 CORO1BQ9BR76 489 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 DESI2Q9BSY9 194 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 THAP2Q9H0W7 228 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 ADAM7Q9H2U9 754 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 CRISPLD1Q9H336 500 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLPB-210ENST00000539148 COG5Q9UP83 839 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 JRKLQ9Y4A0 524 aa10.71□□□□□ -0.69
CLPB-210ENST00000539148 ZFP37Q9Y6Q3 630 aaPredicted RBP10.71□□□□□ -0.69
CLPB-210ENST00000539148 CHD9Q3L8U1 2897 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 TULP2O00295 520 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 CCL16O15467 120 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 PAPSS1O43252 624 aaPredicted RBP10.7□□□□□ -0.7
CLPB-210ENST00000539148 DAB1O75553 588 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 SOAT2O75908 522 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 VNN2O95498 520 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 ABL1P00519 1130 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 MYL4P12829 197 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 NCAM1P13591 858 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 RRM1P23921 792 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 GABRR2P28476 465 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 ATP5C1P36542 298 aaKnown RBP10.7□□□□□ -0.7
CLPB-210ENST00000539148 MATKP42679 507 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 SLC1A1P43005 524 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 CACNA2D1P54289 1103 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 EPHA5P54756 1037 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 HADHBP55084 474 aaKnown RBP10.7□□□□□ -0.7
CLPB-210ENST00000539148 COG7P83436 770 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 KCNC3Q14003 757 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 MTF1Q14872 753 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 SKIV2LQ15477 1246 aaKnown RBP10.7□□□□□ -0.7
CLPB-210ENST00000539148 CLUL1Q15846 466 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 CCDC142Q17RM4 750 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 HECTD3Q5T447 861 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 BSPRYQ5W0U4 402 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 KLHDC10Q6PID8 442 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 OLFML1Q6UWY5 402 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 FAM183BPQ6ZVS7 135 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 GPR149Q86SP6 731 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 MICALL1Q8N3F8 863 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 SCAMP5Q8TAC9 235 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 FEZF2Q8TBJ5 459 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 SERPINB11Q96P15 392 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 CDX2Q99626 313 aaPredicted RBP10.7□□□□□ -0.7
CLPB-210ENST00000539148 CNPY3Q9BT09 278 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 NUP85Q9BW27 656 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 ATXN3LQ9H3M9 355 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLPB-210ENST00000539148 SLC12A6Q9UHW9 1150 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 CYTH4Q9UIA0 394 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 NENFQ9UMX5 172 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 MRPS23Q9Y3D9 190 aaKnown RBP10.7□□□□□ -0.7
CLPB-210ENST00000539148 C2orf16Q68DN1 1984 aa10.7□□□□□ -0.7
CLPB-210ENST00000539148 HELZP42694 1942 aaKnown RBP10.69□□□□□ -0.7
CLPB-210ENST00000539148 TRAV19A0A0A6YYK7 116 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 RFPL2O75678 378 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 MTA2O94776 668 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 RHOP08100 348 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 PDGFRAP16234 1089 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 HMGA1P17096 107 aaKnown RBP10.69□□□□□ -0.7
CLPB-210ENST00000539148 TCP1P17987 556 aaKnown RBP10.69□□□□□ -0.7
CLPB-210ENST00000539148 GPD1P21695 349 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 AVPR1AP37288 418 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 PTPN9P43378 593 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 GPR15P49685 360 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 RNASE9P60153 205 aaKnown RBP10.69□□□□□ -0.7
CLPB-210ENST00000539148 PTP4A2Q12974 167 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 NNTQ13423 1086 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 MAMLD1Q13495 774 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 COL19A1Q14993 1142 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 HADHQ16836 314 aaKnown RBP10.69□□□□□ -0.7
CLPB-210ENST00000539148 AAK1Q2M2I8 961 aa10.69□□□□□ -0.7
CLPB-210ENST00000539148 CTC1Q2NKJ3 1217 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms