RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 MYO1EQ12965 1108 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 MCM6Q14566 821 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 STARD3Q14849 445 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 HECTD3Q5T447 861 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 TPGS1Q6ZTW0 290 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 DPH6Q7L8W6 267 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 ENGASEQ8NFI3 743 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 CADM4Q8NFZ8 388 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 CXorf38Q8TB03 319 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 MYCBPAPQ8TBZ2 947 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 SNX19Q92543 992 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 WBP2Q969T9 261 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 CALML4Q96GE6 196 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 HPDLQ96IR7 371 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 ZFRQ96KR1 1074 aaKnown RBP11.84□□□□□ -0.51
CLPB-208ENST00000538021 C8orf48Q96LL4 319 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 MMS19Q96T76 1030 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 BBS2Q9BXC9 721 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 MTMR12Q9C0I1 747 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 SIX4Q9UIU6 781 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 AK5Q9Y6K8 562 aa11.84□□□□□ -0.51
CLPB-208ENST00000538021 GOLGA8IPA6NC78 632 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 GOLGA8JA6NMD2 632 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 METTL12A8MUP2 240 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 KCNJ18B7U540 433 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 KCNK3O14649 394 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 TLX3O43711 291 aaPredicted RBP11.83□□□□□ -0.52
CLPB-208ENST00000538021 JUPP14923 745 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 GRK6P43250 576 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 PTPRNQ16849 979 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 KIF19Q2TAC6 998 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 FUT11Q495W5 492 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 C6orf118Q5T5N4 469 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 GPR155Q7Z3F1 870 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 TMPRSS12Q86WS5 348 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 NUP93Q8N1F7 819 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 PDZD8Q8NEN9 1154 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 RASSF8Q8NHQ8 419 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 LLPHQ9BRT6 129 aaKnown RBP11.83□□□□□ -0.52
CLPB-208ENST00000538021 CCSER2Q9H7U1 834 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 ITM2CQ9NQX7 267 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 GMIPQ9P107 970 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 USP36Q9P275 1121 aaKnown RBP11.83□□□□□ -0.52
CLPB-208ENST00000538021 SNX11Q9Y5W9 270 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 STON1Q9Y6Q2 735 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 ATMQ13315 3056 aa11.83□□□□□ -0.52
CLPB-208ENST00000538021 TEX51A0A1B0GUA7 166 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 GFRA2O00451 464 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 CACNG3O60359 315 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 WARSP23381 471 aaKnown RBP11.82□□□□□ -0.52
CLPB-208ENST00000538021 OXTRP30559 389 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 GNL1P36915 607 aaPredicted RBP11.82□□□□□ -0.52
CLPB-208ENST00000538021 UBA7P41226 1012 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 DGKGP49619 791 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 TPMTP51580 245 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 AFF3P51826 1226 aaKnown RBP11.82□□□□□ -0.52
CLPB-208ENST00000538021 CLDN6P56747 220 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 HMGN5P82970 282 aaKnown RBP11.82□□□□□ -0.52
CLPB-208ENST00000538021 SF3A1Q15459 793 aaKnown RBP11.82□□□□□ -0.52
CLPB-208ENST00000538021 ZNF720Q7Z2F6 126 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 METTL3Q86U44 580 aaKnown RBP11.82□□□□□ -0.52
CLPB-208ENST00000538021 CACUL1Q86Y37 369 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 TMPRSS6Q8IU80 811 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 OR6B3Q8NGW1 331 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 BAP1Q92560 729 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 BHMTQ93088 406 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 SIPA1Q96FS4 1042 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 ANKRD36BP1Q96IX9 119 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 TRIM9Q9C026 710 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 ZNF518BQ9C0D4 1074 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 ELOVL4Q9GZR5 314 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 MKRN2Q9H000 416 aaKnown RBP11.82□□□□□ -0.52
CLPB-208ENST00000538021 SNX25Q9H3E2 840 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 ST6GALNAC4Q9H4F1 302 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 BLOC1S4Q9NUP1 217 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 TMEM30AQ9NV96 361 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 WDR35Q9P2L0 1181 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 FTSJ1Q9UET6 329 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 EXOC7Q9UPT5 735 aa11.82□□□□□ -0.52
CLPB-208ENST00000538021 MUC22E2RYF6 1773 aaPredicted RBP11.82□□□□□ -0.52
CLPB-208ENST00000538021 MGAQ8IWI9 3026 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 KNL1Q8NG31 2342 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 KNTC1P50748 2209 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 CABIN1Q9Y6J0 2220 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 CAPN8A6NHC0 703 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 CLDN5O00501 218 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 SYNCRIPO60506 623 aaKnown RBP11.81□□□□□ -0.52
CLPB-208ENST00000538021 RTN3O95197 1032 aaPredicted RBP11.81□□□□□ -0.52
CLPB-208ENST00000538021 LDHAP00338 332 aaKnown RBP11.81□□□□□ -0.52
CLPB-208ENST00000538021 TNNC2P02585 160 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 ACADMP11310 421 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 DDIT3P35638 169 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 HNF1BP35680 557 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 CCT8P50990 548 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 IL9RQ01113 521 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 KCNA1Q09470 495 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 TEAD4Q15561 434 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 TAF1BQ53T94 588 aaPredicted RBP11.81□□□□□ -0.52
CLPB-208ENST00000538021 MCTP1Q6DN14 999 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms