RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 NACC2Q96BF6 587 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 C8orf48Q96LL4 319 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 SLC2A11Q9BYW1 496 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 NRAPQ86VF7 1730 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 TNFRSF10AO00220 468 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 DHRS4L1P0CG22 281 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 ITGAXP20702 1163 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 FGFR3P22607 806 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 ANXA13P27216 316 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 CLK2P49760 499 aaKnown RBP11.07□□□□□ -0.64
RTN3-208ENST00000537981 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.64
RTN3-208ENST00000537981 SF3B3Q15393 1217 aaKnown RBP11.07□□□□□ -0.64
RTN3-208ENST00000537981 EDRF1Q3B7T1 1238 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 LDLRAP1Q5SW96 308 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 KAZNQ674X7 775 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 RNF19BQ6ZMZ0 732 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 GSTA5Q7RTV2 222 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 PTAR1Q7Z6K3 402 aaPredicted RBP11.07□□□□□ -0.64
RTN3-208ENST00000537981 RSPH3Q86UC2 560 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 RDH13Q8NBN7 331 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 EGLN2Q96KS0 407 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 CRISPLD2Q9H0B8 497 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 SNX25Q9H3E2 840 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 CASS4Q9NQ75 786 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 CNTN3Q9P232 1028 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 STRIP2Q9ULQ0 834 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 CACNA1SQ13698 1873 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 PSMD11O00231 422 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 KLHL41O60662 606 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 SIN3BO75182 1162 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 LYPLA1O75608 230 aaPredicted RBP11.07□□□□□ -0.64
RTN3-208ENST00000537981 TGDSO95455 350 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 KRT18P05783 430 aaKnown RBP11.07□□□□□ -0.64
RTN3-208ENST00000537981 P4HA1P13674 534 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 GLRA2P23416 452 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 RPA1P27694 616 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 SIM2Q14190 667 aaPredicted RBP11.07□□□□□ -0.64
RTN3-208ENST00000537981 KNOP1Q1ED39 458 aaKnown RBP11.07□□□□□ -0.64
RTN3-208ENST00000537981 ZNF829Q3KNS6 432 aaPredicted RBP11.07□□□□□ -0.64
RTN3-208ENST00000537981 FRMD7Q6ZUT3 714 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 SLC38A6Q8IZM9 456 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 ALLCQ8N6M5 410 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 SLC44A5Q8NCS7 719 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 ETNPPLQ8TBG4 499 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 BORCS5Q969J3 196 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 ANKRD36BP1Q96IX9 119 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 WNK4Q96J92 1243 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 FEM1CQ96JP0 617 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 PKP2Q99959 881 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 GIN1Q9NXP7 522 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 IGSF9Q9P2J2 1179 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 NR2E3Q9Y5X4 410 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 ST14Q9Y5Y6 855 aa11.07□□□□□ -0.64
RTN3-208ENST00000537981 COL1A1P02452 1464 aaPredicted RBP11.06□□□□□ -0.64
RTN3-208ENST00000537981 KDM1AO60341 852 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 FOSP01100 380 aaPredicted RBP11.06□□□□□ -0.64
RTN3-208ENST00000537981 FGRP09769 529 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 BMP3P12645 472 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 CCDC130P13994 396 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 SSTR3P32745 418 aaPredicted RBP11.06□□□□□ -0.64
RTN3-208ENST00000537981 GRIA3P42263 894 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 FMO5P49326 533 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 HADHBP55084 474 aaKnown RBP11.06□□□□□ -0.64
RTN3-208ENST00000537981 CTSWP56202 376 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 CABP4P57796 275 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 ADAM17P78536 824 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 TFAP4Q01664 338 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 CLUL1Q15846 466 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 AARS2Q5JTZ9 985 aaKnown RBP11.06□□□□□ -0.64
RTN3-208ENST00000537981 FOXR2Q6PJQ5 311 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 KRT25Q7Z3Z0 450 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 DSG4Q86SJ6 1040 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 ANKRD13BQ86YJ7 626 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 TICAM1Q8IUC6 712 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 RELL1Q8IUW5 271 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 SAMD3Q8N6K7 520 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 SVIPQ8NHG7 77 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 DDI1Q8WTU0 396 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 DCAKDQ8WVC6 231 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 TFB1MQ8WVM0 346 aaKnown RBP11.06□□□□□ -0.64
RTN3-208ENST00000537981 COA7Q96BR5 231 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 ITPKCQ96DU7 683 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 THAP11Q96EK4 314 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 ZNF778Q96MU6 729 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 TMUB1Q9BVT8 246 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 INTS2Q9H0H0 1204 aaKnown RBP11.06□□□□□ -0.64
RTN3-208ENST00000537981 SEMA6AQ9H2E6 1030 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 AS3MTQ9HBK9 375 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 RIMS3Q9UJD0 308 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 RAB26Q9ULW5 256 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 ATRNL1Q5VV63 1379 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 PSME4Q14997 1843 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 A0A0B4J269 797 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 IFRD1O00458 451 aaPredicted RBP11.06□□□□□ -0.64
RTN3-208ENST00000537981 CHRNB1P11230 501 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 NR4A2P43354 598 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 CCT8P50990 548 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 EIF3EP60228 445 aaKnown RBP11.06□□□□□ -0.64
RTN3-208ENST00000537981 OTUD4Q01804 1114 aaKnown RBP11.06□□□□□ -0.64
RTN3-208ENST00000537981 POU5F1BQ06416 359 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms