RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 CINPQ9BW66 212 aaPredicted RBP10.41□□□□□ -0.74
GGA3-201ENST00000537686 LRRC40Q9H9A6 602 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 PCDH9Q9HC56 1237 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 CHST12Q9NRB3 414 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 CD274Q9NZQ7 290 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 HES2Q9Y543 173 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.41□□□□□ -0.74
GGA3-201ENST00000537686 SHANK3Q9BYB0 1731 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 CNTRLQ7Z7A1 2325 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 H3BQF6 201 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 PJA2O43164 708 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 TBC1D12O60347 775 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 HNRNPCL1O60812 293 aaKnown RBP10.41□□□□□ -0.74
GGA3-201ENST00000537686 RPLP2P05387 115 aaKnown RBP10.41□□□□□ -0.74
GGA3-201ENST00000537686 CYP2F1P24903 491 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 PTPN7P35236 360 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 PSEN2P49810 448 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 FAM83EQ2M2I3 478 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 MIIPQ5JXC2 388 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 IQSEC1Q6DN90 963 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 CXCL17Q6UXB2 119 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 KDM7AQ6ZMT4 941 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 CREG2Q8IUH2 290 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 AGGF1Q8N302 714 aaeCLIP10.41□□□□□ -0.74
GGA3-201ENST00000537686 ADAM32Q8TC27 787 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 CELF6Q96J87 481 aaKnown RBP10.41□□□□□ -0.74
GGA3-201ENST00000537686 PGLYRP2Q96PD5 576 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 PAFAH2Q99487 392 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 AVENQ9NQS1 362 aaPredicted RBP10.41□□□□□ -0.74
GGA3-201ENST00000537686 TRPM5Q9NZQ8 1165 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 CRLS1Q9UJA2 301 aa10.41□□□□□ -0.74
GGA3-201ENST00000537686 MTO1Q9Y2Z2 717 aaKnown RBP10.41□□□□□ -0.74
GGA3-201ENST00000537686 F8VP50 259 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 ASS1P00966 412 aaKnown RBP10.4□□□□□ -0.74
GGA3-201ENST00000537686 DNAJB2P25686 324 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 SOX11P35716 441 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 KCNMA1Q12791 1236 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 FSCN1Q16658 493 aaKnown RBP10.4□□□□□ -0.74
GGA3-201ENST00000537686 ADCK2Q7Z695 626 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 DEFB128Q7Z7B8 93 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 CCNJLQ8IV13 435 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 KIRREL3Q8IZU9 778 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 NUP93Q8N1F7 819 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 CENPKQ9BS16 269 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 TINF2Q9BSI4 451 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 APOL5Q9BWW9 433 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 TAS2R14Q9NYV8 317 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 PKD2L2Q9NZM6 624 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 PCDHA3Q9Y5H8 950 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 E5RJQ4 531 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 SUPT7LO94864 414 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 EGFRP00533 1210 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 ALDH2P05091 517 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 DNAL1Q4LDG9 190 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 SYTL3Q4VX76 610 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 MRNIPQ6NTE8 343 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 USP50Q70EL3 339 aaPredicted RBP10.4□□□□□ -0.74
GGA3-201ENST00000537686 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 RFWD2Q8NHY2 731 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.743e-6■■□□□ 13.9
GGA3-201ENST00000537686 FAM84AQ96KN4 292 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 MRPL1Q9BYD6 325 aaKnown RBP10.4□□□□□ -0.74
GGA3-201ENST00000537686 CCDC90BQ9GZT6 254 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 RBM22Q9NW64 420 aaKnown RBP eCLIP10.4□□□□□ -0.74
GGA3-201ENST00000537686 DSEQ9UL01 958 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 AAR2Q9Y312 384 aaKnown RBP10.4□□□□□ -0.74
GGA3-201ENST00000537686 PCDHGC5Q9Y5F6 944 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 ZNF541Q9H0D2 1346 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 CNTNAP2Q9UHC6 1331 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 IRS2Q9Y4H2 1338 aa10.4□□□□□ -0.74
GGA3-201ENST00000537686 HOXA2O43364 376 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 MIPP30301 263 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 GLRBP48167 497 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 PPIL2Q13356 520 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 MTFR1Q15390 333 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 SGO1Q5FBB7 561 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 RARS2Q5T160 578 aaKnown RBP10.4□□□□□ -0.75
GGA3-201ENST00000537686 LAYNQ6UX15 382 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 KAT2BQ92831 832 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 TNFRSF25Q93038 417 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 FOPNLQ96NB1 174 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 KCNK16Q96T55 309 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 TBCBQ99426 244 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 DCLK3Q9C098 648 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 ZNF212Q9UDV6 495 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 SHOC2Q9UQ13 582 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 NHSQ6T4R5 1651 aa10.4□□□□□ -0.75
GGA3-201ENST00000537686 MICAL2O94851 1124 aa10.39□□□□□ -0.75
GGA3-201ENST00000537686 KLHL2O95198 593 aa10.39□□□□□ -0.75
GGA3-201ENST00000537686 ABCE1P61221 599 aaKnown RBP10.39□□□□□ -0.75
GGA3-201ENST00000537686 BMPR2Q13873 1038 aa10.39□□□□□ -0.75
GGA3-201ENST00000537686 PTK2BQ14289 1009 aa10.39□□□□□ -0.75
GGA3-201ENST00000537686 CELF3Q5SZQ8 465 aaKnown RBP10.39□□□□□ -0.75
GGA3-201ENST00000537686 ZNF410Q86VK4 478 aa10.39□□□□□ -0.75
GGA3-201ENST00000537686 LONP2Q86WA8 852 aa10.39□□□□□ -0.75
GGA3-201ENST00000537686 SLC26A11Q86WA9 606 aa10.39□□□□□ -0.75
GGA3-201ENST00000537686 DEFB106AQ8N104 65 aa10.39□□□□□ -0.75
GGA3-201ENST00000537686 IKZF4Q9H2S9 585 aa10.39□□□□□ -0.75
GGA3-201ENST00000537686 TMBIM4Q9HC24 238 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms