RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 TMEM35BQ8NCS4 154 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ATL2Q8NHH9 583 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CHMP6Q96FZ7 201 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PIWIL1Q96J94 861 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 SEC16BQ96JE7 1060 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ZNF317Q96PQ6 595 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 YME1L1Q96TA2 773 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 HTATIP2Q9BUP3 242 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PCDHB8Q9UN66 801 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 RASGRF2O14827 1237 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 EFCAB14O75071 495 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 BEST1O76090 585 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ERBB2P04626 1255 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 MMP8P22894 467 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 GPD2P43304 727 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 LHX1P48742 406 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 YWHAHQ04917 246 aaPredicted RBP13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ACTN3Q08043 901 aaPredicted RBP13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 AUHQ13825 339 aaKnown RBP13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CCNG2Q16589 344 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PKDCCQ504Y2 493 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 RTP2Q5QGT7 225 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 SPOUT1Q5T280 376 aaKnown RBP13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 LRRTM3Q86VH5 581 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 RHOT1Q8IXI2 618 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 KATNAL2Q8IYT4 538 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 C1orf54Q8WWF1 131 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 SNF8Q96H20 258 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PCED1BQ96HM7 432 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TNIP3Q96KP6 325 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ZNF518BQ9C0D4 1074 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CHST7Q9NS84 486 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 KRT82Q9NSB4 513 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ADAM22Q9P0K1 906 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 SCINQ9Y6U3 715 aa13.52□□□□□ -0.24
CDK5RAP3-202ENST00000536708 LCHNA4D1U4 455 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 TCEA3O75764 348 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 GJB5O95377 273 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 ALDH2P05091 517 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 CHN1P15882 459 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 IFT88Q13099 833 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 MAMLD1Q13495 774 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 RNF187Q5TA31 235 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 ARHGAP17Q68EM7 881 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 PSRC1Q6PGN9 363 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 FAM43BQ6ZT52 329 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 RELL1Q8IUW5 271 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 CACNA2D3Q8IZS8 1091 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 GPATCH11Q8N954 259 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 MDM1Q8TC05 714 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 MYLPFQ96A32 169 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 SERPINB12Q96P63 405 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 PKMYT1Q99640 499 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 TMEM175Q9BSA9 504 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 HERPUD2Q9BSE4 406 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 B3GNT5Q9BYG0 378 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 CDC42EP4Q9H3Q1 356 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 ACTR5Q9H9F9 607 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 CEP83Q9Y592 693 aa13.52□□□□□ -0.25
CDK5RAP3-202ENST00000536708 SF3B1O75533 1304 aaKnown RBP eCLIP13.52□□□□□ -0.251e-11■■■■■ 43.1
CDK5RAP3-202ENST00000536708 TLDC2A0PJX2 215 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 GABBR2O75899 941 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 GAS8O95995 478 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 TYMPP19971 482 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 ALDH7A1P49419 539 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 IFI35P80217 286 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 LACTB2Q53H82 288 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 INTS6LQ5JSJ4 861 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 C9orf50Q5SZB4 431 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 UBAP2Q5T6F2 1119 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 GKAP1Q5VSY0 366 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 PMF1Q6P1K2 205 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 KCNT2Q6UVM3 1135 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 PRSS55Q6UWB4 352 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 TAOK1Q7L7X3 1001 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 FAM35AQ86V20 835 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 TAX1BP1Q86VP1 789 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 METTL23Q86XA0 190 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 BBOF1Q8ND07 529 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 EXD1Q8NHP7 514 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 COLEC11Q9BWP8 271 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 LHX5Q9H2C1 402 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 ZNF638Q14966 1978 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 E5RJQ4 531 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 LINC00271P0C7V0 271 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 PCSK1P29120 753 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 DAB2IPQ5VWQ8 1189 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 FAM109BQ6ICB4 259 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 RSPO2Q6UXX9 243 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 ERICH1Q86X53 443 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 CMTR2Q8IYT2 770 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 COLGALT1Q8NBJ5 622 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 IGSF21Q96ID5 467 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 MED10Q9BTT4 135 aa13.51□□□□□ -0.25
CDK5RAP3-202ENST00000536708 CXorf56Q9H5V9 222 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms