RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 PLPP4Q5VZY2 271 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 RHBDF2Q6PJF5 856 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 CCDC89Q8N998 374 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 XXYLT1Q8NBI6 393 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 ZNF653Q96CK0 615 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 ZNF558Q96NG5 402 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 FIZ1Q96SL8 496 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 SLX1AQ9BQ83 275 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 ST6GALNAC4Q9H4F1 302 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 CYP26B1Q9NR63 512 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 FGFR1OP2Q9NVK5 253 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 DNAAF2Q9NVR5 837 aaKnown RBP12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 ATXN10Q9UBB4 475 aa12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 DBR1Q9UK59 544 aaKnown RBP12.14□□□□□ -0.47
CHRNB1-202ENST00000536404 SFI1A8K8P3 1242 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 K7ENM7 598 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 DCXO43602 365 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 HIP1RO75146 1068 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 E2F6O75461 281 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 DCTN3O75935 186 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 EOMESO95936 686 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 P4HBP07237 508 aaKnown RBP12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 GTF2H1P32780 548 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 PHKA2P46019 1235 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 MXI1P50539 228 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 CDC42EP1Q00587 391 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 CDR2Q01850 454 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 SIX1Q15475 284 aaPredicted RBP12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 ASRGL1Q7L266 308 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 LRRC43Q8N309 656 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 EPS8L1Q8TE68 723 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 PIGOQ8TEQ8 1089 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 AGAP11Q8TF27 550 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 SLC20A1Q8WUM9 679 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 INPP5DQ92835 1189 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 LPPQ93052 612 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 TMEM143Q96AN5 459 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 CEP170P1Q96L14 293 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 NLRP4Q96MN2 994 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 TTC25Q96NG3 672 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 FAM192AQ9GZU8 254 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 DMAP1Q9NPF5 467 aaPredicted RBP12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 AVENQ9NQS1 362 aaPredicted RBP12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 CHST12Q9NRB3 414 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 SPG21Q9NZD8 308 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 SUN2Q9UH99 717 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 ANAPC5Q9UJX4 755 aa12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 NOCTQ9UK39 431 aaKnown RBP12.13□□□□□ -0.47
CHRNB1-202ENST00000536404 MEIS3P2A8K0S8 358 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 HIDE1A8MVS5 230 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 NT5C1B-RDH14C9J2C7 533 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 ZBTB39O15060 712 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 PSMD7P51665 324 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 TAF11Q15544 211 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 LONRF1Q17RB8 773 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 ACAD10Q6JQN1 1059 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 PDE12Q6L8Q7 609 aaKnown RBP12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 VSTM1Q6UX27 236 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 ZNF410Q86VK4 478 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 ZNF677Q86XU0 584 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 SLC39A11Q8N1S5 342 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 SMRP1Q8NCR6 262 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 PRPF31Q8WWY3 499 aaKnown RBP12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 SHC3Q92529 594 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 CFAP57Q96MR6 1250 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 AGAP3Q96P47 875 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 TMEM237Q96Q45 408 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 TCF25Q9BQ70 676 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 SMG5Q9UPR3 1016 aaKnown RBP12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 LZTS1Q9Y250 596 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 STARD13Q9Y3M8 1113 aa12.12□□□□□ -0.47
CHRNB1-202ENST00000536404 PRR33A8MZF0 331 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 DIAPH2O60879 1101 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 UNC5CO95185 931 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 SRGAP2CP0DJJ0 459 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 PLA2G5P39877 138 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 BPIFB4P59827 614 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 RNASELQ05823 741 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 TWF2Q6IBS0 349 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 LLGL2Q6P1M3 1020 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 RGS9BPQ6ZS82 235 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 CATSPER4Q7RTX7 472 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 TMC7Q7Z402 723 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 RNF135Q8IUD6 432 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 ANKRD42Q8N9B4 389 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 FAM122AQ96E09 287 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 NAF1Q96HR8 494 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 NT5C1BQ96P26 610 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 CDCA3Q99618 268 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 TUBB6Q9BUF5 446 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 CCDC28BQ9BUN5 200 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 APOL5Q9BWW9 433 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 PITPNM3Q9BZ71 974 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 INO80BQ9C086 356 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 IFT122Q9HBG6 1241 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 LRRC4CQ9HCJ2 640 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 ENTPD7Q9NQZ7 604 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 MUTYHQ9UIF7 546 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms