RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 DAOAP59103 153 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 FAAP100Q0VG06 881 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 NOMO1Q15155 1222 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 SLC25A52Q3SY17 297 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 TTMPQ5BVD1 217 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 PHLDB2Q86SQ0 1253 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 DDX42Q86XP3 938 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL21A1-212ENST00000535941 RNF169Q8NCN4 708 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 NUP210Q8TEM1 1887 aaPredicted RBP8.35□□□□□ -1.07
COL21A1-212ENST00000535941 ZNF689Q96CS4 500 aaPredicted RBP8.35□□□□□ -1.07
COL21A1-212ENST00000535941 THOC1Q96FV9 657 aaKnown RBP8.35□□□□□ -1.07
COL21A1-212ENST00000535941 ZNF333Q96JL9 665 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 ZIM3Q96PE6 472 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 TMEM175Q9BSA9 504 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 CD248Q9HCU0 757 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 STARD7Q9NQZ5 370 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 MTUS1Q9ULD2 1270 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 E7ESA3 106 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 HSF2BPO75031 334 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 GCKP35557 465 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 RNASE9P60153 205 aaKnown RBP8.35□□□□□ -1.07
COL21A1-212ENST00000535941 FAM102AQ5T9C2 384 aaPredicted RBP8.35□□□□□ -1.07
COL21A1-212ENST00000535941 UBE2Q1Q7Z7E8 422 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 PIGZQ86VD9 579 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 LRRTM3Q86VH5 581 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 OR6B3Q8NGW1 331 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 BCAS4Q8TDM0 211 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 GRK7Q8WTQ7 553 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 SYT15Q9BQS2 421 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 APOL6Q9BWW8 343 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 PCDH18Q9HCL0 1135 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 CNGB3Q9NQW8 809 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 FAM49BQ9NUQ9 324 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 DDX43Q9NXZ2 648 aaKnown RBP8.35□□□□□ -1.07
COL21A1-212ENST00000535941 CPSF2Q9P2I0 782 aaKnown RBP8.35□□□□□ -1.07
COL21A1-212ENST00000535941 ZMYND8Q9ULU4 1186 aaPredicted RBP8.35□□□□□ -1.07
COL21A1-212ENST00000535941 GINS2Q9Y248 185 aa8.35□□□□□ -1.07
COL21A1-212ENST00000535941 UTP11Q9Y3A2 253 aaKnown RBP8.35□□□□□ -1.07
COL21A1-212ENST00000535941 SCN8AQ9UQD0 1980 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 TJP3O95049 919 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 LINC00271P0C7V0 271 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 ITIH2P19823 946 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 TGM2P21980 687 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 SNX16P57768 344 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 CAV1Q03135 178 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 DPYSQ14117 519 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 NAA25Q14CX7 972 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 RNASEH2BQ5TBB1 312 aaKnown RBP8.34□□□□□ -1.07
COL21A1-212ENST00000535941 ZNF276Q8N554 614 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 MAGOHBQ96A72 148 aaKnown RBP8.34□□□□□ -1.07
COL21A1-212ENST00000535941 CFAP57Q96MR6 1250 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 FOXP3Q9BZS1 431 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 SNX25Q9H3E2 840 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 USP29Q9HBJ7 922 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 LRRC4CQ9HCJ2 640 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 SPATS2LQ9NUQ6 558 aaKnown RBP8.34□□□□□ -1.07
COL21A1-212ENST00000535941 TBC1D13Q9NVG8 400 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 MYBPHLA2RUH7 354 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 SYN3O14994 580 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 DGKIO75912 1065 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 ECEL1O95672 775 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 NRG1Q02297 640 aaPredicted RBP8.34□□□□□ -1.07
COL21A1-212ENST00000535941 KRT17Q04695 432 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 C15orf59Q2T9L4 293 aaPredicted RBP8.34□□□□□ -1.07
COL21A1-212ENST00000535941 SLC39A5Q6ZMH5 540 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 ZNF280BQ86YH2 543 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 ANKLE1Q8NAG6 615 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 GLIS1Q8NBF1 620 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 TLCD1Q96CP7 247 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 CCDC97Q96F63 343 aaPredicted RBP8.34□□□□□ -1.07
COL21A1-212ENST00000535941 SMARCD1Q96GM5 515 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 PCDH9Q9HC56 1237 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 DNPEPQ9ULA0 475 aa8.34□□□□□ -1.07
COL21A1-212ENST00000535941 G3BP2Q9UN86 482 aaKnown RBP8.34□□□□□ -1.07
COL21A1-212ENST00000535941 MIA3Q5JRA6 1907 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 BCLAF3A2AJT9 711 aaKnown RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 KLHL33A6NCF5 533 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 F8W810 466 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 AMHP03971 560 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 KRT1P04264 644 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 KCNA4P22459 653 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 GGCXP38435 758 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 MAGEA3P43357 314 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 MAGEA11P43364 429 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 HCAR3P49019 387 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 DNA2P51530 1060 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 ZKSCAN8Q15776 578 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 BOLA3Q53S33 107 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 ZC3H12AQ5D1E8 599 aaKnown RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 MDH1BQ5I0G3 518 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 EFHC1Q5JVL4 640 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 UBAP2Q5T6F2 1119 aaKnown RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 MANEALQ5VSG8 457 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 SCUBE3Q8IX30 993 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 DNAJC5GQ8N7S2 189 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 ATG4AQ8WYN0 398 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 SNF8Q96H20 258 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 CEP295NLQ96MC4 621 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 RNF157Q96PX1 679 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 WDR83Q9BRX9 315 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms