RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MDM4O15151 490 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 XPOTO43592 962 aaKnown RBP13.92□□□□□ -0.18
VPS33B-202ENST00000535906 PIAS1O75925 651 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 TKTP29401 623 aaKnown RBP13.92□□□□□ -0.18
VPS33B-202ENST00000535906 PPP6R3Q5H9R7 873 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-202ENST00000535906 TRABD2AQ86V40 505 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 ADGRF2Q8IZF7 708 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 LRRN4Q8WUT4 740 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 APBA2Q99767 749 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 RABGEF1Q9UJ41 708 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 ZMYND8Q9ULU4 1186 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-202ENST00000535906 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 APOL1O14791 398 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 HUS1O60921 280 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 PTPN9P43378 593 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 BCAR1P56945 870 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 SNCBQ16143 134 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 PKN2Q16513 984 aaKnown RBP13.92□□□□□ -0.18
VPS33B-202ENST00000535906 SV2CQ496J9 727 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 SLC9A4Q6AI14 798 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 C3orf62Q6ZUJ4 267 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 SPATA21Q7Z572 469 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 OSTM1Q86WC4 334 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 IFNL1Q8IU54 200 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 FBXO36Q8NEA4 188 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 CENPIQ92674 756 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-202ENST00000535906 PLCD4Q9BRC7 762 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 PHACTR1Q9C0D0 580 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 KIF9Q9HAQ2 790 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 CACNG4Q9UBN1 327 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 FAM47DPA6NHR8 397 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 MGRN1O60291 552 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 C6orf222P0C671 652 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-202ENST00000535906 GNAT1P11488 350 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 CTGFP29279 349 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 L1CAMP32004 1257 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 RDXP35241 583 aaKnown RBP13.91□□□□□ -0.18
VPS33B-202ENST00000535906 EFTUD2Q15029 972 aaKnown RBP eCLIP13.91□□□□□ -0.188e-9■■■■■ 34.3
VPS33B-202ENST00000535906 BBS9Q3SYG4 887 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 FAM133BQ5BKY9 247 aaKnown RBP13.91□□□□□ -0.18
VPS33B-202ENST00000535906 GBP7Q8N8V2 638 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-202ENST00000535906 B3GALNT2Q8NCR0 500 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 TRPV1Q8NER1 839 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 ARL2BPQ9Y2Y0 163 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 TNPO2O14787 897 aaKnown RBP13.91□□□□□ -0.18
VPS33B-202ENST00000535906 KCNN4O15554 427 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 SPAG7O75391 227 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 DESP17661 470 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 TGM2P21980 687 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 RBL1P28749 1068 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 PDIK1LQ8N165 341 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 CCDC63Q8NA47 563 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 NDRG1Q92597 394 aaKnown RBP13.91□□□□□ -0.18
VPS33B-202ENST00000535906 FAF2Q96CS3 445 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 TSPAN18Q96SJ8 248 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 ZNF670Q9BS34 389 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 NMRK2Q9NPI5 230 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 PRKAG3Q9UGI9 489 aa13.91□□□□□ -0.18
VPS33B-202ENST00000535906 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 CFAP73A6NFT4 308 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 CLDN5O00501 218 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 BEST1O76090 585 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 UBOX5O94941 541 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 AKR1A1P14550 325 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 ACAT1P24752 427 aaKnown RBP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 CYP2F1P24903 491 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 AFF1P51825 1210 aaKnown RBP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 SLC18A1P54219 525 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 ELF3P78545 371 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 IL9RQ01113 521 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 KCNJ11Q14654 390 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 GALNTL6Q49A17 601 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 EFHC2Q5JST6 749 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 ARCQ7LC44 396 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 VSIG1Q86XK7 387 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 IGDCC3Q8IVU1 814 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 ATP11CQ8NB49 1132 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 GRAMD1AQ96CP6 724 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 TNIP3Q96KP6 325 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 HSFY1Q96LI6 401 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 PPP1R10Q96QC0 940 aaKnown RBP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 DHX35Q9H5Z1 703 aaKnown RBP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 NRDE2Q9H7Z3 1164 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 PPCSQ9HAB8 311 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 CD248Q9HCU0 757 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 MTMR10Q9NXD2 777 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 SMAPO00193 183 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 PRPF4O43172 522 aaKnown RBP eCLIP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 KRT15P19012 456 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 TAC1P20366 129 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 WARSP23381 471 aaKnown RBP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 LRPAP1P30533 357 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 SCNN1AP37088 669 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 ACADSBP45954 432 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 GEMIN4P57678 1058 aaKnown RBP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 RNASELQ05823 741 aaKnown RBP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 RASA2Q15283 850 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 MTFR1Q15390 333 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 ZKSCAN8Q15776 578 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-202ENST00000535906 DPYSL2Q16555 572 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms