RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 ADAMTS14Q8WXS8 1223 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 OVCA2Q8WZ82 227 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 FOXJ1Q92949 421 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 BHMTQ93088 406 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 HPS3Q969F9 1004 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 ZFRQ96KR1 1074 aaKnown RBP8.52□□□□□ -1.05
CHFR-211ENST00000535897 KCNK16Q96T55 309 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 ACOX2Q99424 681 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 MIR1-1HGQ9H1L0 117 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 SLC6A17Q9H1V8 727 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 DMAP1Q9NPF5 467 aaPredicted RBP8.52□□□□□ -1.05
CHFR-211ENST00000535897 CD93Q9NPY3 652 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 CACNA2D2Q9NY47 1150 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 GMIPQ9P107 970 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 FBXO2Q9UK22 296 aaPredicted RBP8.52□□□□□ -1.05
CHFR-211ENST00000535897 APOBEC2Q9Y235 224 aaKnown RBP8.52□□□□□ -1.05
CHFR-211ENST00000535897 GPSM3Q9Y4H4 160 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 NME7Q9Y5B8 376 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 SRPRBQ9Y5M8 271 aaKnown RBP8.52□□□□□ -1.05
CHFR-211ENST00000535897 RAD54BQ9Y620 910 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 ACACAQ13085 2346 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 LOC400499M0QZD8 3231 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 APC2O95996 2303 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 TLR5O60602 858 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 TYRP14679 529 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 TUBP50607 506 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 CYP2J2P51589 502 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 GRIK2Q13002 908 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 STARD3Q14849 445 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 SCARA5Q6ZMJ2 495 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 FAM35AQ86V20 835 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 ZCCHC9Q8N567 271 aaKnown RBP8.51□□□□□ -1.05
CHFR-211ENST00000535897 PDILTQ8N807 584 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 GLIS3Q8NEA6 775 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 MDM1Q8TC05 714 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 HNRNPLLQ8WVV9 542 aaKnown RBP8.51□□□□□ -1.05
CHFR-211ENST00000535897 WBP2Q969T9 261 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 SMARCD1Q96GM5 515 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 MRGPRX1Q96LB2 322 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 SMYD3Q9H7B4 428 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 KRT82Q9NSB4 513 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 WDR35Q9P2L0 1181 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 LSM7Q9UK45 103 aaKnown RBP8.51□□□□□ -1.05
CHFR-211ENST00000535897 RAXQ9Y2V3 346 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 STARD13Q9Y3M8 1113 aa8.51□□□□□ -1.05
CHFR-211ENST00000535897 HELZ2Q9BYK8 2649 aaKnown RBP8.5□□□□□ -1.05
CHFR-211ENST00000535897 MYH10P35580 1976 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 A0A1B0GTW7 788 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 FRMD3A2A2Y4 597 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 GOLGA8CPA6NN73 597 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 PRRT4C9JH25 899 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 CACNG3O60359 315 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 FLNBO75369 2602 aaKnown RBP8.5□□□□□ -1.05
CHFR-211ENST00000535897 AP1G2O75843 785 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 CD2BP2O95400 341 aaKnown RBP8.5□□□□□ -1.05
CHFR-211ENST00000535897 TBX18O95935 607 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 NCAM1P13591 858 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 CD6P30203 668 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 DGKGP49619 791 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 CDH8P55286 799 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 MYL6P60660 151 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 BIRC3Q13489 604 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 ZNF699Q32M78 642 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 SOWAHCQ53LP3 525 aaPredicted RBP8.5□□□□□ -1.05
CHFR-211ENST00000535897 CCNI2Q6ZMN8 369 aaPredicted RBP8.5□□□□□ -1.05
CHFR-211ENST00000535897 TOGARAM2Q6ZUX3 1019 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 CACUL1Q86Y37 369 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 SYAP1Q96A49 352 aaPredicted RBP8.5□□□□□ -1.05
CHFR-211ENST00000535897 JAKMIP2Q96AA8 810 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 TOE1Q96GM8 510 aaKnown RBP8.5□□□□□ -1.05
CHFR-211ENST00000535897 ZNF419Q96HQ0 510 aaPredicted RBP8.5□□□□□ -1.05
CHFR-211ENST00000535897 LRIG1Q96JA1 1093 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 TNIP3Q96KP6 325 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 CGRRF1Q99675 332 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 GABRG3Q99928 467 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 GPR174Q9BXC1 333 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 ZDHHC5Q9C0B5 715 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 LRRC27Q9C0I9 530 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 PRDM16Q9HAZ2 1276 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.5□□□□□ -1.05
CHFR-211ENST00000535897 TLR8Q9NR97 1041 aaKnown RBP8.5□□□□□ -1.05
CHFR-211ENST00000535897 AGPAT3Q9NRZ7 376 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 HCN2Q9UL51 889 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 CELSR3Q9NYQ7 3312 aa8.5□□□□□ -1.05
CHFR-211ENST00000535897 A0A087X0B3 334 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 WASH3PC4AMC7 463 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 CLIC2O15247 247 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 SYNCRIPO60506 623 aaKnown RBP8.49□□□□□ -1.05
CHFR-211ENST00000535897 GJB3O75712 270 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 CER1O95813 267 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 CAPNS1P04632 268 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 FAM163BP0C2L3 166 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 CCDC130P13994 396 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 TRIM21P19474 475 aaKnown RBP8.49□□□□□ -1.05
CHFR-211ENST00000535897 PDCP20941 246 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 ATICP31939 592 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 ATP5C1P36542 298 aaKnown RBP8.49□□□□□ -1.05
CHFR-211ENST00000535897 MAP3K7CLP57077 242 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 ASIC1P78348 528 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 CYP24A1Q07973 514 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms