RNA–Protein interactions for RNA: ENST00000535844.1

AC048338.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC048338.1, Length 2,748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048338.1-201ENST00000535844 IKBKGQ9Y6K9 419 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 MSCO60682 206 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 SUPT3HO75486 399 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 KRT36O76013 467 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 HNRNPCP07910 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 ZCCHC18P0CG32 403 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 MLH1P40692 756 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 KPNB1Q14974 876 aaKnown RBP11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 RCN1Q15293 331 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 PPP1R2P3Q6NXS1 205 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 DARS2Q6PI48 645 aaKnown RBP11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 C1orf228Q6PIY5 440 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 C4orf50Q6ZRC1 276 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 CDHR3Q6ZTQ4 885 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 NIPA2Q8N8Q9 360 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 RNF149Q8NC42 400 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 TWNKQ96RR1 684 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 DHRS4Q9BTZ2 278 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 TEX13BQ9BXU2 312 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 ZNF395Q9H8N7 513 aaPredicted RBP11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 ETNK2Q9NVF9 386 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 RABL2BQ9UNT1 228 aa11.62□□□□□ -0.55
AC048338.1-201ENST00000535844 FAM237BA0A1B0GVD1 139 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 MCF2LO15068 1137 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 LSM1O15116 133 aaKnown RBP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 B4GALT5O43286 388 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 INHBAP08476 426 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 KRT7P08729 469 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 UBA1P22314 1058 aaKnown RBP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 BAG6P46379 1132 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 PRKG1Q13976 671 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 DPYSL3Q14195 570 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 R3HDM1Q15032 1099 aaKnown RBP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 CCDC6Q16204 474 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 HADHQ16836 314 aaKnown RBP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 CIAPIN1Q6FI81 312 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 THOC7Q6I9Y2 204 aaKnown RBP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 POLNQ7Z5Q5 900 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 ZNF554Q86TJ5 538 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 ALYREFQ86V81 257 aaKnown RBP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 CCDC33Q8N5R6 958 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 ZNF280CQ8ND82 737 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 CYTH2Q99418 400 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 KCNK13Q9HB14 408 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 TNS1Q9HBL0 1735 aaKnown RBP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 UBAP1Q9NZ09 502 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 MARCOQ9UEW3 520 aaPredicted RBP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 LRCH1Q9Y2L9 728 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 PARP14Q460N5 1801 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 TRIM43BA6NCK2 446 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 SIGLEC16A6NMB1 481 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 TM9SF1O15321 606 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 GYG2O15488 501 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 CSDE1O75534 798 aaKnown RBP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 TOM1L1O75674 476 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 MYL2P10916 166 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 BMPR2Q13873 1038 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 STXBP2Q15833 593 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 PPM1NQ8N819 430 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 WDR60Q8WVS4 1066 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 TRAPPC12Q8WVT3 735 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 MCUR1Q96AQ8 359 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 PIWIL1Q96J94 861 aaKnown RBP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 PEBP4Q96S96 227 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 XYLT2Q9H1B5 865 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 HACL1Q9UJ83 578 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 ITM2BQ9Y287 266 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 AFG3L2Q9Y4W6 797 aa11.61□□□□□ -0.55
AC048338.1-201ENST00000535844 E7ESA3 106 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 TRAFD1O14545 582 aaPredicted RBP11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 ATG7O95352 703 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 PRKCBP05771 671 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 HOXC6P09630 235 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 KITP10721 976 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 CDH6P55285 790 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 ZNF200P98182 395 aaPredicted RBP11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 TAP1Q03518 808 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 TNFAIP1Q13829 316 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 RASA2Q15283 850 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 SMUG1Q53HV7 270 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 ACSBG2Q5FVE4 666 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 XYLT1Q86Y38 959 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 VPS52Q8N1B4 723 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 LSM14AQ8ND56 463 aaKnown RBP11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 UBA3Q8TBC4 463 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.556e-8■■□□□ 13.4
AC048338.1-201ENST00000535844 PTCD3Q96EY7 689 aaKnown RBP11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 NR1H4Q96RI1 486 aaPredicted RBP11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 PPP1R16BQ96T49 567 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 MRPL4Q9BYD3 311 aaKnown RBP11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 ZNF518BQ9C0D4 1074 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 SDCBP2Q9H190 292 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 VPS11Q9H270 941 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 SMYD3Q9H7B4 428 aa11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 SSU72Q9NP77 194 aaKnown RBP11.6□□□□□ -0.55
AC048338.1-201ENST00000535844 GPATCH2LQ9NWQ4 482 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms