RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 FAM180AQ6UWF9 173 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 APOL2Q9BQE5 337 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 TBC1D13Q9NVG8 400 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 WBP4O75554 376 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 THRAP10827 490 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 HSPA13P48723 471 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 CHRNB3Q05901 458 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 OVGP1Q12889 678 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 FBXO47Q5MNV8 452 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 METTL7BQ6UX53 244 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 DDX43Q9NXZ2 648 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 RAD54BQ9Y620 910 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 PSMD12O00232 456 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 RGL2O15211 777 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 SCNN1BP51168 640 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 TROAPQ12815 778 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 Q4G0T1 1027 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 STRA8Q7Z7C7 330 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 NFKBIL1Q9UBC1 381 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 PCDHB5Q9Y5E4 795 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 LSM8O95777 96 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 CYP24A1Q07973 514 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 NFIAQ12857 509 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 GIT2Q14161 759 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 CEP78Q5JTW2 689 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 GMCL1Q96IK5 515 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 MTG1Q9BT17 334 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 TMX2Q9Y320 296 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 PYGMP11217 842 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 RENBPP51606 427 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 NME5P56597 212 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 LAMTOR4Q0VGL1 99 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 NFYCQ13952 458 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 IRAK1BP1Q5VVH5 260 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 NLRP9Q7RTR0 991 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 POP1Q99575 1024 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 ELOVL6Q9H5J4 265 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 AGO4Q9HCK5 861 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 SETD4Q9NVD3 440 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 ITGA11Q9UKX5 1188 aa18.71■□□□□ 0.59
SFSWAP-203ENST00000535236 CCT8L1PA6NM43 557 aa18.71■□□□□ 0.58
SFSWAP-203ENST00000535236 CTDNEP1O95476 244 aa18.71■□□□□ 0.58
SFSWAP-203ENST00000535236 MYL6P60660 151 aa18.71■□□□□ 0.58
SFSWAP-203ENST00000535236 TMEM154Q6P9G4 183 aa18.71■□□□□ 0.58
SFSWAP-203ENST00000535236 LRRC8DQ7L1W4 858 aa18.71■□□□□ 0.58
SFSWAP-203ENST00000535236 HOMEZQ8IX15 550 aa18.71■□□□□ 0.58
SFSWAP-203ENST00000535236 GPAMQ9HCL2 828 aa18.71■□□□□ 0.58
SFSWAP-203ENST00000535236 CISHQ9NSE2 258 aa18.71■□□□□ 0.58
SFSWAP-203ENST00000535236 H3BRB1 525 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 FYNP06241 537 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 MSH3P20585 1137 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 TGFB2P61812 414 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 ATP6AP1LQ52LC2 224 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 TUT1Q9H6E5 874 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 EFCAB1Q9HAE3 211 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 SYBUQ9NX95 663 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 CTNNAL1Q9UBT7 734 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 ZNF23P17027 643 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 HSD17B3P37058 310 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 PTPN11Q06124 597 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 SGCGQ13326 291 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 SPOCD1Q6ZMY3 1216 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 LPCAT1Q8NF37 534 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 DNERQ8NFT8 737 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 POMCP01189 267 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 TNNI3P19429 210 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 KLRC2P26717 231 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 RFX5P48382 616 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 OVOS1Q6IE37 1185 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 SYT15Q9BQS2 421 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 SNTG2Q9NY99 539 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 PLEKP08567 350 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 RETSATQ6NUM9 610 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 ILDR2Q71H61 639 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 C4orf19Q8IY42 314 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 RXFP2Q8WXD0 754 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 PHTF1Q9UMS5 762 aa18.7■□□□□ 0.58
SFSWAP-203ENST00000535236 GSTM1P09488 218 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 VN1R5Q7Z5H4 357 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 LUZP2Q86TE4 346 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 ANKRD49Q8WVL7 239 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 CXCL8P10145 99 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 GRIK4Q16099 956 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 NT5DC3Q86UY8 548 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 PPP1R14AQ96A00 147 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 CAAP1Q9H8G2 361 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 MIEF1Q9NQG6 463 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 SEPT3Q9UH03 358 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 TFR2Q9UP52 801 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 STAU1O95793 577 aaKnown RBP18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 FGFR1P11362 822 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 RAG1P15918 1043 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 CCR1P32246 355 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 MAPK9P45984 424 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 SEL1L3Q68CR1 1132 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 SPIRE2Q8WWL2 714 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 FBXO44Q9H4M3 255 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms