RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RNF14Q9UBS8 474 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 ASB3Q9Y575 518 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 HCFC2Q9Y5Z7 792 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 NCANO14594 1321 aa12.89□□□□□ -0.35
SCARB1-204ENST00000535005 PAPSS1O43252 624 aaPredicted RBP12.88□□□□□ -0.35
SCARB1-204ENST00000535005 KIF1CO43896 1103 aaKnown RBP12.88□□□□□ -0.35
SCARB1-204ENST00000535005 ZMYND10O75800 440 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 SOAT2O75908 522 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 KIAA0754O94854 1291 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 RTN3O95197 1032 aaPredicted RBP12.88□□□□□ -0.35
SCARB1-204ENST00000535005 ERBB2P04626 1255 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 CYP1A2P05177 515 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 C8AP07357 584 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 POU2F2P09086 479 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 CHRM1P11229 460 aaPredicted RBP12.88□□□□□ -0.35
SCARB1-204ENST00000535005 EPCAMP16422 314 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 TCP1P17987 556 aaKnown RBP12.88□□□□□ -0.35
SCARB1-204ENST00000535005 NRIP1P48552 1158 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 CCT5P48643 541 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 TKTL1P51854 596 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 VAV2P52735 878 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 SLC5A3P53794 718 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 GPC5P78333 572 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 TCEAL1Q15170 157 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 TMEM184AQ6ZMB5 413 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 DENND5BQ6ZUT9 1274 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 GPRIN1Q7Z2K8 1008 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 RBM23Q86U06 439 aaKnown RBP12.88□□□□□ -0.35
SCARB1-204ENST00000535005 XYLT1Q86Y38 959 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 SLC7A14Q8TBB6 771 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 MYRFLQ96LU7 910 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 RUFY1Q96T51 708 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 PACSIN1Q9BY11 444 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 EHD2Q9NZN4 543 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 TJP2Q9UDY2 1190 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 MTCH2Q9Y6C9 303 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 TCRBV5S1A1TA0A578 114 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 SLC38A8A6NNN8 435 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 HSF2BPO75031 334 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 HNRNPA1P09651 372 aaKnown RBP eCLIP12.88□□□□□ -0.35
SCARB1-204ENST00000535005 CSH1P0DML2 217 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 CSH2P0DML3 217 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 EPHB3P54753 998 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 ADIGQ0VDE8 80 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 TWF1Q12792 350 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 VEPH1Q14D04 833 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 SDHAF4Q5VUM1 108 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 PLEKHA7Q6IQ23 1121 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 DNAAF5Q86Y56 855 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 SIX6OS1Q8N1H7 587 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 C3orf20Q8ND61 904 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 BCAS4Q8TDM0 211 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 CTNNBL1Q8WYA6 563 aaPredicted RBP12.88□□□□□ -0.35
SCARB1-204ENST00000535005 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.88□□□□□ -0.351e-10■■■■■ 65
SCARB1-204ENST00000535005 IRGQQ8WZA9 623 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 THAP2Q9H0W7 228 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 FBXO44Q9H4M3 255 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 MAN1C1Q9NR34 630 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 ZDHHC7Q9NXF8 308 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 SNX12Q9UMY4 172 aa12.88□□□□□ -0.35
SCARB1-204ENST00000535005 PLXNA3P51805 1871 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 PATJQ8NI35 1801 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 BTNL10A8MVZ5 291 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 SART1O43290 800 aaKnown RBP12.87□□□□□ -0.35
SCARB1-204ENST00000535005 ZBED1O96006 694 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 GLI1P08151 1106 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 LCP1P13796 627 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 HMGA1P17096 107 aaKnown RBP12.87□□□□□ -0.35
SCARB1-204ENST00000535005 RRM1P23921 792 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 HNRNPH1P31943 449 aaKnown RBP12.87□□□□□ -0.35
SCARB1-204ENST00000535005 DAOAP59103 153 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 GNGT1P63211 74 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 SLC6A3Q01959 620 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 HYAL1Q12794 435 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 KIF5AQ12840 1032 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 ADGRE1Q14246 886 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 C2CD6Q53TS8 623 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 TCEAL5Q5H9L2 206 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 PPM1LQ5SGD2 360 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 CYP4A22Q5TCH4 519 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 OLFML1Q6UWY5 402 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 ARCQ7LC44 396 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 ITIH5Q86UX2 942 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 SCUBE3Q8IX30 993 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 EFHBQ8N7U6 833 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 SCAMP5Q8TAC9 235 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 GIPC2Q8TF65 315 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 CASP10Q92851 521 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 PSMG2Q969U7 264 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 ZNF653Q96CK0 615 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 TRMT2BQ96GJ1 504 aaKnown RBP12.87□□□□□ -0.35
SCARB1-204ENST00000535005 CABS1Q96KC9 395 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 ULBP1Q9BZM6 244 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 DZANK1Q9NVP4 752 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 ASNSD1Q9NWL6 643 aa12.87□□□□□ -0.35
SCARB1-204ENST00000535005 CNOT8Q9UFF9 292 aaKnown RBP12.87□□□□□ -0.35
SCARB1-204ENST00000535005 SCML2Q9UQR0 700 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms