RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 MBD1Q9UIS9 605 aaPredicted RBP12.24□□□□□ -0.45
CTNND1-238ENST00000534647 STARD13Q9Y3M8 1113 aa12.24□□□□□ -0.45
CTNND1-238ENST00000534647 PTPRDP23468 1912 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 ATP8B3O60423 1300 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 PVALEFA0A1B0GWK0 134 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 SPTLC2O15270 562 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 ABL1P00519 1130 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 C7P10643 843 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 MYL6P60660 151 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 TRPC3Q13507 836 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 TRIM61Q5EBN2 209 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 BTBD8Q5XKL5 378 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 PAQR9Q6ZVX9 377 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 UNC13DQ70J99 1090 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 HTR3DQ70Z44 454 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 CEP76Q8TAP6 659 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 SCFD1Q8WVM8 642 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 RLN3Q8WXF3 142 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 FBXO32Q969P5 355 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 CCDC127Q96BQ5 260 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 TNIP3Q96KP6 325 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 KCNK16Q96T55 309 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 MAGEF1Q9HAY2 307 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 SPHK2Q9NRA0 654 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 TMEM74BQ9NUR3 256 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 CHORDC1Q9UHD1 332 aaPredicted RBP12.23□□□□□ -0.45
CTNND1-238ENST00000534647 PILRBQ9UKJ0 227 aa12.23□□□□□ -0.45
CTNND1-238ENST00000534647 NUP205Q92621 2012 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 TBC1D3BA6NDS4 549 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 C1QTNF9BB2RNN3 333 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 CFAP99D6REC4 459 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 CLDN5O00501 218 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 CLIC2O15247 247 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 AP5Z1O43299 807 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 TULP3O75386 442 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 MBD3O95983 291 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 C1QTNF9P0C862 333 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 PTGER3P43115 390 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 ASIC1P78348 528 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 KRT85P78386 507 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 SEMA3BQ13214 749 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 STK38Q15208 465 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 SLC36A4Q6YBV0 504 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 RABEPKQ7Z6M1 372 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 PIP4P1Q86T03 277 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 TMEFF1Q8IYR6 380 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 CRYBG2Q8N1P7 616 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 SCAMP5Q8TAC9 235 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 HMGB4Q8WW32 186 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 GATA6Q92908 595 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 ADAM33Q9BZ11 813 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 SLC32A1Q9H598 525 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 CSNK1G1Q9HCP0 422 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 DMAP1Q9NPF5 467 aaPredicted RBP12.22□□□□□ -0.45
CTNND1-238ENST00000534647 LMBRD1Q9NUN5 540 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 BCCIPQ9P287 314 aaKnown RBP eCLIP12.22□□□□□ -0.45
CTNND1-238ENST00000534647 DEC1Q9P2X7 70 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 SLC6A14Q9UN76 642 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 CFAP47Q6ZTR5 3102 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 LAMA1P25391 3075 aa12.22□□□□□ -0.45
CTNND1-238ENST00000534647 ZFHX4Q86UP3 3567 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 TCRBV21S2A2A0A5A6 115 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 GREM1O60565 184 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 CUTAO60888 179 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 YEATS4O95619 227 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 C4BPAP04003 597 aaKnown RBP12.21□□□□□ -0.45
CTNND1-238ENST00000534647 SERPINF2P08697 491 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 ENGP17813 658 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 NTSR1P30989 418 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 CYP2J2P51589 502 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 SLC5A3P53794 718 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 FOXC1Q12948 553 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 KNOP1Q1ED39 458 aaKnown RBP12.21□□□□□ -0.45
CTNND1-238ENST00000534647 DUOXA1Q1HG43 343 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 CRTC2Q53ET0 693 aaPredicted RBP12.21□□□□□ -0.45
CTNND1-238ENST00000534647 LYSMD4Q5XG99 296 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 SHC4Q6S5L8 630 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 FAM35AQ86V20 835 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 TTC30AQ86WT1 665 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 TMEM25Q86YD3 366 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 BBS7Q8IWZ6 715 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 FUKQ8N0W3 1084 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 FRMD1Q8N878 549 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 ZNF513Q8N8E2 541 aaPredicted RBP12.21□□□□□ -0.45
CTNND1-238ENST00000534647 TERB1Q8NA31 727 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 GOLGA5Q8TBA6 731 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 PARD3BQ8TEW8 1205 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 DHX58Q96C10 678 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 SMARCD1Q96GM5 515 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 ZNF396Q96N95 335 aaPredicted RBP12.21□□□□□ -0.45
CTNND1-238ENST00000534647 SCNM1Q9BWG6 230 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 FBXO44Q9H4M3 255 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 CCSER2Q9H7U1 834 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 CD248Q9HCU0 757 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 MARK1Q9P0L2 795 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 NXF1Q9UBU9 619 aaKnown RBP12.21□□□□□ -0.45
CTNND1-238ENST00000534647 HCN2Q9UL51 889 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 SH3BP1Q9Y3L3 701 aa12.21□□□□□ -0.45
CTNND1-238ENST00000534647 NEUROG3Q9Y4Z2 214 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms