RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
CHRDL2-209ENST00000534276 TATDN2Q93075 761 aa13□□□□□ -0.33
CHRDL2-209ENST00000534276 HPDLQ96IR7 371 aa13□□□□□ -0.33
CHRDL2-209ENST00000534276 CALR3Q96L12 384 aaKnown RBP13□□□□□ -0.33
CHRDL2-209ENST00000534276 EPC1Q9H2F5 836 aa13□□□□□ -0.33
CHRDL2-209ENST00000534276 THG1LQ9NWX6 298 aaKnown RBP13□□□□□ -0.33
CHRDL2-209ENST00000534276 ADAMTS1Q9UHI8 967 aa13□□□□□ -0.33
CHRDL2-209ENST00000534276 NAGPAQ9UK23 515 aa13□□□□□ -0.33
CHRDL2-209ENST00000534276 GTF3C4Q9UKN8 822 aa13□□□□□ -0.33
CHRDL2-209ENST00000534276 TICRRQ7Z2Z1 1910 aa13□□□□□ -0.33
CHRDL2-209ENST00000534276 A0A087X0T9 212 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 SOBPA7XYQ1 873 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 HCRTO43612 131 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 CST3P01034 146 aaPredicted RBP12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 FAM228BP0C875 321 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 GZMAP12544 262 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 TNFAIP3P21580 790 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 DDX6P26196 483 aaKnown RBP eCLIP12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 PCSK1P29120 753 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 AVPR1AP37288 418 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 CXCL12P48061 93 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 TERF1P54274 439 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 NRLP54845 237 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 NOP14P78316 857 aaKnown RBP12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 ARID5AQ03989 594 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 MYO1EQ12965 1108 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 TUBB2AQ13885 445 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 PPP2R5DQ14738 602 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 CCDC142Q17RM4 750 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 CCDC122Q5T0U0 273 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 TXNDC8Q6A555 127 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 DPH6Q7L8W6 267 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 MON1AQ86VX9 555 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 SPEM1Q8N4L4 309 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 MAB21L3Q8N8X9 362 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 STKLD1Q8NE28 680 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 UBE2Q2Q8WVN8 375 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 USP13Q92995 863 aaPredicted RBP12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 AGPAT1Q99943 283 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 FAM83CQ9BQN1 747 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 TUBB2BQ9BVA1 445 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 NIF3L1Q9GZT8 377 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 RBM12Q9NTZ6 932 aaKnown RBP12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 MAGED2Q9UNF1 606 aaPredicted RBP12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 SMG5Q9UPR3 1016 aaKnown RBP12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 CCL26Q9Y258 94 aa12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 R3HCC1Q9Y3T6 440 aaKnown RBP12.99□□□□□ -0.33
CHRDL2-209ENST00000534276 P4HA1P13674 534 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 SATB1Q01826 763 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 GFPT1Q06210 699 aaPredicted RBP12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 ITPRIPL2Q3MIP1 535 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 CFAP221Q4G0U5 840 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 DGKKQ5KSL6 1271 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 PPP1R2P3Q6NXS1 205 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 ALKBH5Q6P6C2 394 aaKnown RBP12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 FAM171BQ6P995 826 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 Q6ZS52 159 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 ERMP1Q7Z2K6 904 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 SPATA2LQ8IUW3 424 aaPredicted RBP12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 KBTBD7Q8WVZ9 684 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 MRPS31Q92665 395 aaKnown RBP12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 RMDN1Q96DB5 314 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 FUBP3Q96I24 572 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 MYRFLQ96LU7 910 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 SYT15Q9BQS2 421 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 XYLT2Q9H1B5 865 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 CYP3A43Q9HB55 503 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 LZTFL1Q9NQ48 299 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 GKN1Q9NS71 199 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 TDP1Q9NUW8 608 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 NCDNQ9UBB6 729 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 DMDP11532 3685 aa12.98□□□□□ -0.33
CHRDL2-209ENST00000534276 A0A0A6YYK5 440 aaPredicted RBP12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 DDX3XO00571 662 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 ATP2C2O75185 946 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 TADA3O75528 432 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 ACO1P21399 889 aaKnown RBP12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 LMO2P25791 158 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 MYL6P60660 151 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 GNG11P61952 73 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 CYP27A1Q02318 531 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 CCINQ13939 588 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 PON2Q15165 354 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 ZNF699Q32M78 642 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 SYT10Q6XYQ8 523 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 UBR7Q8N806 425 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 EPS8L1Q8TE68 723 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 TRMT2BQ96GJ1 504 aaKnown RBP12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 KIF9Q9HAQ2 790 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 APOBEC3GQ9HC16 384 aaKnown RBP12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 HPS4Q9NQG7 708 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 UXTQ9UBK9 157 aaPredicted RBP12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 NOCTQ9UK39 431 aaKnown RBP12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 CDH9Q9ULB4 789 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 CACNA1AO00555 2505 aa12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 NUP210Q8TEM1 1887 aaPredicted RBP12.97□□□□□ -0.33
CHRDL2-209ENST00000534276 CYP26A1O43174 497 aa12.96□□□□□ -0.33
CHRDL2-209ENST00000534276 PAPSS2O95340 614 aaPredicted RBP12.96□□□□□ -0.33
CHRDL2-209ENST00000534276 H2AFZP0C0S5 128 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms