RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 DEUP1Q05D60 604 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 STK3Q13188 491 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 SEMA3AQ14563 771 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 TTF1Q15361 905 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-205ENST00000533776 ZNF793Q6ZN11 406 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 OVCH2Q7RTZ1 564 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 MICU3Q86XE3 530 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 CHPFQ8IZ52 775 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 C11orf44Q8N8P7 122 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 IGFBPL1Q8WX77 278 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 TRMOQ9BU70 441 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 RTFDC1Q9BY42 306 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-205ENST00000533776 HIPK2Q9H2X6 1198 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 USP29Q9HBJ7 922 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 STK32BQ9NY57 414 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 CPNE7Q9UBL6 633 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 HDAC9Q9UKV0 1011 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 RIMKLBQ9ULI2 386 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 PAXBP1Q9Y5B6 917 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 USP19O94966 1318 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 SHROOM4Q9ULL8 1493 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 TCF20Q9UGU0 1960 aaKnown RBP3.6□□□□□ -1.83
BRCA2-205ENST00000533776 FYB1O15117 783 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 CCP110O43303 1012 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 TULP3O75386 442 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 TUSC2O75896 110 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 BRAFP15056 766 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 TACR3P29371 465 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 GATMP50440 423 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 MCL1Q07820 350 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 MTX1Q13505 466 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 KPNB1Q14974 876 aaKnown RBP3.59□□□□□ -1.83
BRCA2-205ENST00000533776 ZNF750Q32MQ0 723 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 TMEM63BQ5T3F8 832 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 SWSAP1Q6NVH7 229 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 ZNF549Q6P9A3 640 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 MAEAQ7L5Y9 396 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 METTL25Q8N6Q8 603 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 C12orf76Q8N812 135 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-205ENST00000533776 SMRP1Q8NCR6 262 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 NGDNQ8NEJ9 315 aaKnown RBP3.59□□□□□ -1.83
BRCA2-205ENST00000533776 EDC3Q96F86 508 aaKnown RBP3.59□□□□□ -1.83
BRCA2-205ENST00000533776 SUCLG2Q96I99 432 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 HIC2Q96JB3 615 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 LYZL4Q96KX0 146 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 SCNM1Q9BWG6 230 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 C22orf23Q9BZE7 217 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 TRIM36Q9NQ86 728 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 ZBTB40Q9NUA8 1239 aa3.59□□□□□ -1.83
BRCA2-205ENST00000533776 GAR1Q9NY12 217 aaKnown RBP3.59□□□□□ -1.83
BRCA2-205ENST00000533776 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-205ENST00000533776 E2F8A0AVK6 867 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 TRIM43BA6NCK2 446 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 CAPN8A6NHC0 703 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 RAB27BO00194 218 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 INPPL1O15357 1258 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 AKAP10O43572 662 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 PARP1P09874 1014 aaKnown RBP3.58□□□□□ -1.84
BRCA2-205ENST00000533776 KRT10P13645 584 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 NTSR1P30989 418 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 TXNL4AP83876 142 aaKnown RBP3.58□□□□□ -1.84
BRCA2-205ENST00000533776 HSF1Q00613 529 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 STIM1Q13586 685 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 ARHGEF7Q14155 803 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 ERV3-1Q14264 604 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 PFKFB3Q16875 520 aaPredicted RBP3.58□□□□□ -1.84
BRCA2-205ENST00000533776 C3orf38Q5JPI3 329 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 DAB2IPQ5VWQ8 1189 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 EPM2AIP1Q7L775 607 aaPredicted RBP3.58□□□□□ -1.84
BRCA2-205ENST00000533776 PNPLA1Q8N8W4 532 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 TRIM43Q96BQ3 446 aaPredicted RBP3.58□□□□□ -1.84
BRCA2-205ENST00000533776 KAZALD1Q96I82 304 aa3.58□□□□□ -1.84
BRCA2-205ENST00000533776 NKX1-2Q9UD57 310 aaPredicted RBP3.58□□□□□ -1.84
BRCA2-205ENST00000533776 NOP58Q9Y2X3 529 aaKnown RBP3.58□□□□□ -1.84
BRCA2-205ENST00000533776 hCG_2014768A0A024R1R8 64 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 CFAP69A5D8W1 941 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 A8MVJ9 347 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 SMAD6O43541 496 aaKnown RBP3.57□□□□□ -1.84
BRCA2-205ENST00000533776 CA12O43570 354 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 CTNND1O60716 968 aaKnown RBP3.57□□□□□ -1.84
BRCA2-205ENST00000533776 PRAMEF2O60811 474 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 CD19P15391 556 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 ZKSCAN1P17029 563 aaPredicted RBP3.57□□□□□ -1.84
BRCA2-205ENST00000533776 ADRA1DP25100 572 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 YY1P25490 414 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 ACVR2AP27037 513 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 CDKN2AP42771 156 aaKnown RBP3.57□□□□□ -1.84
BRCA2-205ENST00000533776 RAB27AP51159 221 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 GPC5P78333 572 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 SLC29A2Q14542 456 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 CNN3Q15417 329 aaKnown RBP3.57□□□□□ -1.84
BRCA2-205ENST00000533776 NPY5RQ15761 445 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 LVRNQ6Q4G3 990 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 APOA5Q6Q788 366 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 CLEC9AQ6UXN8 241 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 USP49Q70CQ1 688 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 MMP21Q8N119 569 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 PELI3Q8N2H9 469 aa3.57□□□□□ -1.84
BRCA2-205ENST00000533776 THOC3Q96J01 351 aaKnown RBP3.57□□□□□ -1.84
BRCA2-205ENST00000533776 CAMK1GQ96NX5 476 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms