RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 RIMBP3BA6NNM3 1639 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 RIMBP3Q9UFD9 1639 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 TMEM120BA0PK00 339 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 CARNS1A5YM72 827 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 TBC1D3BA6NDS4 549 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 TRPC5OSA6NMA1 111 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 LGALS2P05162 132 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 MLNP12872 115 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 SP100P23497 879 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ERFP50548 548 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 RENBPP51606 427 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 NDST1P52848 882 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 CHI3L2Q15782 390 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 MARC1Q5VT66 337 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ILDR2Q71H61 639 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 NT5DC3Q86UY8 548 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 SH2D3CQ8N5H7 860 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ARMC2Q8NEN0 867 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ENGASEQ8NFI3 743 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 VMP1Q96GC9 406 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 FAM163AQ96GL9 167 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 GAD1Q99259 594 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 IL1RL2Q9HB29 575 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ZCCHC17Q9NP64 241 aaKnown RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 DMAP1Q9NPF5 467 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 TSPAN16Q9UKR8 245 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 USP20Q9Y2K6 914 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ZMYM2Q9UBW7 1377 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 BCL9O00512 1426 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 NCAM2O15394 837 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 RAMP2O60895 175 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 SEC24DO94855 1032 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 RTN3O95197 1032 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 PLEKP08567 350 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 PSMC6P62333 389 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 MCL1Q07820 350 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 TERF2Q15554 542 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 AGBL2Q5U5Z8 902 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 C11orf74Q86VG3 221 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ABTB1Q969K4 478 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 CCDC126Q96EE4 140 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ZNF558Q96NG5 402 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ELOVL4Q9GZR5 314 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 SEMA6BQ9H3T3 888 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ATP13A1Q9HD20 1204 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 GGT7Q9UJ14 662 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 MTO1Q9Y2Z2 717 aaKnown RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 AGRPO00253 132 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 HNRNPRO43390 633 aaKnown RBP6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 PROSCO94903 275 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 SERPINF2P08697 491 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 HPGDP15428 266 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 OR1E1P30953 314 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 TOB1P50616 345 aaPredicted RBP6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 RAD23BP54727 409 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 HNRNPH2P55795 449 aaKnown RBP6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 GJC2Q5T442 439 aaPredicted RBP6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 TTI2Q6NXR4 508 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 TRMT11Q7Z4G4 463 aaKnown RBP6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 HORMAD1Q86X24 394 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 LPCAT1Q8NF37 534 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 TNIP2Q8NFZ5 429 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 CEP70Q8NHQ1 597 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 ATG4AQ8WYN0 398 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 SERPINB11Q96P15 392 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 NDEL1Q9GZM8 345 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 VIPAS39Q9H9C1 493 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 IL17RBQ9NRM6 502 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 RBM22Q9NW64 420 aaKnown RBP eCLIP6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 APPL1Q9UKG1 709 aa6.59□□□□□ -1.36
UBQLN1-206ENST00000533705 TMEM150BA6NC51 233 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 GOLGA8TH3BQL2 631 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 KPNA3O00505 521 aaPredicted RBP6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 ADIGQ0VDE8 80 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 ZBTB17Q13105 803 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 LAYNQ6UX15 382 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 DSG4Q86SJ6 1040 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 SLC44A2Q8IWA5 706 aaPredicted RBP6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 KRT78Q8N1N4 520 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 SLC20A1Q8WUM9 679 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 SLC5A5Q92911 643 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 TUBGCP3Q96CW5 907 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 CELF6Q96J87 481 aaKnown RBP6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 MANSC1Q9H8J5 431 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 SYTL2Q9HCH5 934 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 IARS2Q9NSE4 1012 aaKnown RBP6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 TBC1D13Q9NVG8 400 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 UBP1Q9NZI7 540 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 USP15Q9Y4E8 981 aaPredicted RBP6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 UMODL1Q5DID0 1318 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 USP32Q8NFA0 1604 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 TCRBV5S4A2TA0A5A2 114 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 FAM86B1E9PN63 330 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 F8VZ95 297 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 UBXN8O00124 270 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 GLRA3O75311 464 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 GLP2RO95838 553 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 GUCA1CO95843 209 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 FAM86B2P0C5J1 330 aa6.58□□□□□ -1.36
UBQLN1-206ENST00000533705 PRKAR2AP13861 404 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms