RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SEC13P55735 322 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 PSMC1P62191 440 aaKnown RBP9.23□□□□□ -0.93
COPB1-210ENST00000533533 CLDN10P78369 228 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 CRY1Q16526 586 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 GAB4Q2WGN9 574 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 CAVIN1Q6NZI2 390 aaKnown RBP9.23□□□□□ -0.93
COPB1-210ENST00000533533 VSTM1Q6UX27 236 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 C4orf50Q6ZRC1 276 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 DPH6Q7L8W6 267 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 CYP2U1Q7Z449 544 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 LIMS2Q7Z4I7 341 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 CCDC33Q8N5R6 958 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 KIAA1958Q8N8K9 716 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 MDGA1Q8NFP4 955 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 TAS1R2Q8TE23 839 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 KBTBD7Q8WVZ9 684 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 CEP295NLQ96MC4 621 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 SYT15Q9BQS2 421 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 SMYD3Q9H7B4 428 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 TRPM5Q9NZQ8 1165 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 MAGEC2Q9UBF1 373 aaPredicted RBP9.23□□□□□ -0.93
COPB1-210ENST00000533533 CDH9Q9ULB4 789 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 MMP17Q9ULZ9 603 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 WASF3Q9UPY6 502 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 NBEAQ8NFP9 2946 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 ZNF840PA6NDX5 716 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 ANTXRLA6NF34 631 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 PATE3B3GLJ2 98 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 LEFTY2O00292 366 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 ALDH1A2O94788 518 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 GNA14O95837 355 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 CYP17A1P05093 508 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 PYGBP11216 843 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 CD58P19256 250 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 WARSP23381 471 aaKnown RBP9.22□□□□□ -0.93
COPB1-210ENST00000533533 BDNFP23560 247 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 LMO2P25791 158 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 GRIK1P39086 918 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 MTIF2P46199 727 aaKnown RBP9.22□□□□□ -0.93
COPB1-210ENST00000533533 DHPSP49366 369 aaPredicted RBP9.22□□□□□ -0.93
COPB1-210ENST00000533533 USP46P62068 366 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 NOP14P78316 857 aaKnown RBP9.22□□□□□ -0.93
COPB1-210ENST00000533533 IRX4P78413 519 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 SLC7A9P82251 487 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 MRPS21P82921 87 aaKnown RBP9.22□□□□□ -0.93
COPB1-210ENST00000533533 CYP27A1Q02318 531 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 ENPEPQ07075 957 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 LRMPQ12912 555 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 FOXC1Q12948 553 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 GSE1Q14687 1217 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 MAPRE1Q15691 268 aaKnown RBP9.22□□□□□ -0.93
COPB1-210ENST00000533533 CBWD6Q4V339 395 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 HSP90AA4PQ58FG1 418 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 MDH1BQ5I0G3 518 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 CBWD3Q5JTY5 395 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 CBWD5Q5RIA9 395 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 DENND5BQ6ZUT9 1274 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 ZC3H3Q8IXZ2 948 aaKnown RBP9.22□□□□□ -0.93
COPB1-210ENST00000533533 ADGRG2Q8IZP9 1017 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 KDF1Q8NAX2 398 aaPredicted RBP9.22□□□□□ -0.93
COPB1-210ENST00000533533 FBXL13Q8NEE6 735 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 OLIG1Q8TAK6 271 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 PIGKQ92643 395 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 TAF4BQ92750 862 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 MYLPFQ96A32 169 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 TTLL2Q9BWV7 592 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 XYLT2Q9H1B5 865 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 CRTAC1Q9NQ79 661 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 RAB20Q9NX57 234 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 ZMIZ1Q9ULJ6 1067 aa9.22□□□□□ -0.93
COPB1-210ENST00000533533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.22□□□□□ -0.93
COPB1-210ENST00000533533 ITPR1Q14643 2758 aa9.21□□□□□ -0.93
COPB1-210ENST00000533533 PES1O00541 588 aaKnown RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 SLC9A3R1O14745 358 aaPredicted RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 TRIM66O15016 1216 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 TACC1O75410 805 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 STAU1O95793 577 aaKnown RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 TOP3BO95985 862 aaKnown RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 ASS1P00966 412 aaKnown RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 CHRM1P11229 460 aaPredicted RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 HNRNPLP14866 589 aaKnown RBP eCLIP9.21□□□□□ -0.94
COPB1-210ENST00000533533 TRIM21P19474 475 aaKnown RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 SPINK2P20155 84 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 PTMSP20962 102 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 ANXA13P27216 316 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 P2RY2P41231 377 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 PPP3CCP48454 512 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 FMO5P49326 533 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 MESP2Q0VG99 397 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 CETN1Q12798 172 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 LMAN2Q12907 356 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 ORC1Q13415 861 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 DHCR24Q15392 516 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 UAP1L1Q3KQV9 507 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 HSF5Q4G112 596 aaPredicted RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 TRIM61Q5EBN2 209 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 TMEM92Q6UXU6 159 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 LPCAT2Q7L5N7 544 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 TTC30AQ86WT1 665 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 SFTPA1Q8IWL2 248 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms