RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 OR6B2Q6IFH4 312 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 C11orf74Q86VG3 221 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 LCORLQ8N3X6 602 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 OR8H1Q8NGG4 311 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 UCMAQ8WVF2 138 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 DPF3Q92784 378 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 PGBD4Q96DM1 585 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 SGF29Q96ES7 293 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 RBBP8Q99708 897 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 KIAA1586Q9HCI6 787 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 NGRNQ9NPE2 291 aaKnown RBP8.08□□□□□ -1.12
CSRP1-218ENST00000533402 GJB4Q9NTQ9 266 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 PTTG2Q9NZH5 202 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 FOLH1Q04609 750 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 TTMPQ5BVD1 217 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 DENND5AQ6IQ26 1287 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 EXOC3L1Q86VI1 746 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 HS6ST3Q8IZP7 471 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 C9orf16Q9BUW7 83 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 PIGUQ9H490 435 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 PCDHGA10Q9Y5H3 936 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 TM9SF1O15321 606 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 SSNA1O43805 119 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 APRTP07741 180 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 RAB25P57735 213 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 DGCR6Q14129 220 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 TAF1CQ15572 869 aaPredicted RBP8.08□□□□□ -1.12
CSRP1-218ENST00000533402 OTUD3Q5T2D3 398 aaPredicted RBP8.08□□□□□ -1.12
CSRP1-218ENST00000533402 ITPRIPL1Q6GPH6 555 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 MINDY2Q8NBR6 621 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 IRF2BPLQ9H1B7 796 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 WDR35Q9P2L0 1181 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 F5H423 210 aaPredicted RBP8.08□□□□□ -1.12
CSRP1-218ENST00000533402 IFNA16P05015 189 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 CD58P19256 250 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 SLC1A1P43005 524 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 CENPTQ96BT3 561 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 TAMM41Q96BW9 452 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 HTATIP2Q9BUP3 242 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 USP42Q9H9J4 1324 aaKnown RBP8.08□□□□□ -1.12
CSRP1-218ENST00000533402 TK2O00142 265 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 STAG3L1P0CL83 205 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 JAK3P52333 1124 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 SNAPC2Q13487 334 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 ALX1Q15699 326 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 KNOP1Q1ED39 458 aaKnown RBP8.08□□□□□ -1.12
CSRP1-218ENST00000533402 SHCBP1Q8NEM2 672 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 MAGEB5Q9BZ81 275 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 MFSD1Q9H3U5 465 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 BARX2Q9UMQ3 279 aaPredicted RBP8.08□□□□□ -1.12
CSRP1-218ENST00000533402 RPL26L1Q9UNX3 145 aaKnown RBP8.08□□□□□ -1.12
CSRP1-218ENST00000533402 PPP2R3BQ9Y5P8 575 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 LMO7Q8WWI1 1683 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 KAT6AQ92794 2004 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 LOC100506127A0A0U1RQW1 187 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 MEIS1O00470 390 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 HOXA2O43364 376 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 HOXC6P09630 235 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 FCGRTP55899 365 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 VAC14Q08AM6 782 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 GTF2H3Q13889 308 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 CNPY1Q3B7I2 92 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 BROXQ5VW32 411 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 PDPK2PQ6A1A2 396 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 ARMC6Q6NXE6 501 aa8.08□□□□□ -1.12
CSRP1-218ENST00000533402 CUEDC1Q9NWM3 386 aaPredicted RBP8.08□□□□□ -1.12
CSRP1-218ENST00000533402 PSMD11O00231 422 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 SH2B2O14492 632 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 APOL1O14791 398 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TFECO14948 347 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 CYP27B1O15528 508 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 NR3C1P04150 777 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TPTEP56180 551 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 SLC15A2Q16348 729 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TBCKQ8TEA7 893 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 USP13Q92995 863 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 C11orf70Q9BRQ4 267 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 UBXN6Q9BZV1 441 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 NUP50Q9UKX7 468 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 UBXN8O00124 270 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 HUS1O60921 280 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TFRCP02786 760 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 KCNJ1P48048 391 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 ACTR2P61160 394 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 COBLL1Q53SF7 1204 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 RNF180Q86T96 592 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 ZC3H10Q96K80 434 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 RPF1Q9H9Y2 349 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 PNPLA3Q9NST1 481 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 ASNSD1Q9NWL6 643 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 KDM6AO15550 1401 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 PHLPP1O60346 1717 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 SNX3O60493 162 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 GUCA1CO95843 209 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 MYCP01106 439 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 FAM228BP0C875 321 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 FUT11Q495W5 492 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TRIM65Q6PJ69 517 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 SH3KBP1Q96B97 665 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 SP140LQ9H930 580 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms