RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 VEPH1Q14D04 833 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 TRADDQ15628 312 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 BMT2Q1RMZ1 405 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 TCERG1LQ5VWI1 586 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 ZPBP2Q6X784 338 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 ATAD1Q8NBU5 361 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 AENQ8WTP8 325 aaKnown RBP8.71□□□□□ -1.01
NEDD8-207ENST00000533242 SPIRE2Q8WWL2 714 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 KIF12Q96FN5 646 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 NOX5Q96PH1 765 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 FAM83CQ9BQN1 747 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 NTPCRQ9BSD7 190 aaKnown RBP8.71□□□□□ -1.01
NEDD8-207ENST00000533242 EDEM2Q9BV94 578 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 DUSP15Q9H1R2 295 aaPredicted RBP8.71□□□□□ -1.01
NEDD8-207ENST00000533242 SMOC1Q9H4F8 434 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 IL21Q9HBE4 155 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 GKN1Q9NS71 199 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 ZMIZ1Q9ULJ6 1067 aa8.71□□□□□ -1.01
NEDD8-207ENST00000533242 ESYT3A0FGR9 886 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 TISP43B9A030 160 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 AFPP02771 609 aaKnown RBP8.71□□□□□ -1.02
NEDD8-207ENST00000533242 CXCL8P10145 99 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 TUFMP49411 452 aaKnown RBP8.71□□□□□ -1.02
NEDD8-207ENST00000533242 CYP4F8P98187 520 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 RUNX3Q13761 415 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 COL9A2Q14055 689 aaPredicted RBP8.71□□□□□ -1.02
NEDD8-207ENST00000533242 ASIC2Q16515 512 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 KYAT1Q16773 422 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 EXOC3L4Q17RC7 722 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 SEZ6Q53EL9 994 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 TTC9BQ8N6N2 239 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 EXOC4Q96A65 974 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 ALS2CR12Q96Q35 445 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 HPS4Q9NQG7 708 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 ANKFY1Q9P2R3 1169 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 ATG2BQ96BY7 2078 aa8.71□□□□□ -1.02
NEDD8-207ENST00000533242 SOBPA7XYQ1 873 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 C1QTNF9BB2RNN3 333 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 SLC26A4O43511 780 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 RNF40O75150 1001 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 GLI1P08151 1106 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 C1QTNF9P0C862 333 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 MAPTP10636 758 aaKnown RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 ODC1P11926 461 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 TCP1P17987 556 aaKnown RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 DRD1P21728 446 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 DDX6P26196 483 aaKnown RBP eCLIP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 GGCXP38435 758 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 FBXO43Q4G163 708 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 DAB2IPQ5VWQ8 1189 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 FOXR1Q6PIV2 292 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 MYCT1Q8N699 235 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 TSEN2Q8NCE0 465 aaKnown RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 SLC46A2Q9BY10 475 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 KIF9Q9HAQ2 790 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 PLCB1Q9NQ66 1216 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 OLFML3Q9NRN5 406 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 GCNT4Q9P109 453 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 HELZP42694 1942 aaKnown RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 CHD8Q9HCK8 2581 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 TNRC6BQ9UPQ9 1833 aaKnown RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 THADAQ6YHU6 1953 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 BCLAF3A2AJT9 711 aaKnown RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 CLDN3O15551 220 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 TBCAO75347 108 aaKnown RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 SOAT2O75908 522 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 APBB3O95704 486 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 EGFP01133 1207 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 TUBBP07437 444 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 TRIM49P0CI25 452 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 TRIM49CP0CI26 452 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 GUCY2CP25092 1073 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 JAM2P57087 298 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 FAM193AP78312 1265 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 ZNF252P-AS1Q0IIN9 211 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 CBWD6Q4V339 395 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 CBWD3Q5JTY5 395 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 CBWD5Q5RIA9 395 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 MEI1Q5TIA1 1274 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 C11orf74Q86VG3 221 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 CMTM8Q8IZV2 173 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 TMEM130Q8N3G9 435 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 RNF10Q8N5U6 811 aaKnown RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 TMEM161BQ8NDZ6 487 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 C2orf15Q8WU43 125 aaKnown RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 CHFRQ96EP1 664 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 HHIPQ96QV1 700 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 LPIN3Q9BQK8 851 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 TMEM121BQ9BXQ6 578 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 ZCWPW1Q9H0M4 648 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 NUCKS1Q9H1E3 243 aaKnown RBP8.7□□□□□ -1.02
NEDD8-207ENST00000533242 FAM204AQ9H8W3 233 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 EBF1Q9UH73 591 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 NAGPAQ9UK23 515 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 NENFQ9UMX5 172 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 WASF3Q9UPY6 502 aa8.7□□□□□ -1.02
NEDD8-207ENST00000533242 C4orf47A7E2U8 309 aa8.69□□□□□ -1.02
NEDD8-207ENST00000533242 LACTBL1A8MY62 500 aa8.69□□□□□ -1.02
NEDD8-207ENST00000533242 DDX3XO00571 662 aaKnown RBP eCLIP8.69□□□□□ -1.022e-10■■□□□ 12.1
NEDD8-207ENST00000533242 CALUO43852 315 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms