RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 LY6G5CQ5SRR4 150 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 ATF7IP2Q5U623 682 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 WSCD1Q658N2 575 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 ZNF324BQ6AW86 544 aaPredicted RBP1.87□□□□□ -2.11
KNL1-211ENST00000533001 NOTUMQ6P988 496 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 C19orf48Q6RUI8 117 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 DYMQ7RTS9 669 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 SEMA4DQ92854 862 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 HPS3Q969F9 1004 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 SENP8Q96LD8 212 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 CEP295NLQ96MC4 621 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 MESP1Q9BRJ9 268 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 SYT11Q9BT88 431 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 NRSN2Q9GZP1 204 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 CCSER2Q9H7U1 834 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 PLEKHA5Q9HAU0 1116 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 SEMA5BQ9P283 1151 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 KANSL3Q9P2N6 904 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 THAP10Q9P2Z0 257 aaPredicted RBP1.87□□□□□ -2.11
KNL1-211ENST00000533001 AJAP1Q9UKB5 411 aaPredicted RBP1.87□□□□□ -2.11
KNL1-211ENST00000533001 GINS2Q9Y248 185 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 TRIM6-TRIM34B2RNG4 842 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 KCNK3O14649 394 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 SRGAP2CP0DJJ0 459 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 PTPN2P17706 415 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 RPL9P32969 192 aaKnown RBP1.87□□□□□ -2.11
KNL1-211ENST00000533001 CCR10P46092 362 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 OR1G1P47890 313 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 PDIA5Q14554 519 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 PRAMEF14Q5SWL7 426 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 MTSS1LQ765P7 747 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 APTXQ7Z2E3 356 aaKnown RBP1.87□□□□□ -2.11
KNL1-211ENST00000533001 CACNA2D4Q7Z3S7 1137 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 FAM186BQ8IYM0 893 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 KIAA0895Q8NCT3 520 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 PIBF1Q8WXW3 757 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 GPR88Q9GZN0 384 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 BHMT2Q9H2M3 363 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 ZFP14Q9HCL3 533 aa1.87□□□□□ -2.11
KNL1-211ENST00000533001 A0A1W2PPR1 153 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 FAM221AA4D161 298 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 PODXLO00592 558 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 VILLO15195 856 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 RAD51BO15315 384 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 GCATO75600 419 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 C4BPAP04003 597 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 MUTP22033 750 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ADCY7P51828 1080 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 NR0B1P51843 470 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 ZNF132P52740 706 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 MSLNQ13421 630 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 SQSTM1Q13501 440 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 UBXN2BQ14CS0 331 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ZACNQ401N2 412 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 TWF2Q6IBS0 349 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 ZNF438Q7Z4V0 828 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 TTC30AQ86WT1 665 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ARHGEF39Q8N4T4 335 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ADAMTS17Q8TE56 1095 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 MIB2Q96AX9 1013 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 HSD3B7Q9H2F3 369 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 KDM4CQ9H3R0 1056 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ZSWIM4Q9H7M6 989 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 PRMT7Q9NVM4 692 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 ADAM21Q9UKJ8 722 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 NTNG1Q9Y2I2 539 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 HRH3Q9Y5N1 445 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 SNX11Q9Y5W9 270 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 DNAH17Q9UFH2 4485 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 A0A1B0GVM2 712 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 DENND3A2RUS2 1198 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 EME2A4GXA9 379 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 MYMKA6NI61 221 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 NOP56O00567 594 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 ASAP2O43150 1006 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 KAT7O95251 611 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 PSAPP07602 524 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 CELA2BP08218 269 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 GRNP28799 593 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 PRPHP41219 470 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 KIF11P52732 1056 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 TARDBPQ13148 414 aaKnown RBP eCLIP1.86□□□□□ -2.118e-11■■■■■ 35.9
KNL1-211ENST00000533001 DNAJC3Q13217 504 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 TRIM61Q5EBN2 209 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 DUS1LQ6P1R4 473 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 FBXO38Q6PIJ6 1188 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 CCAR1Q8IX12 1150 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 C12orf56Q8IXR9 622 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 CADM4Q8NFZ8 388 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ACSF2Q96CM8 615 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 C8orf48Q96LL4 319 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 PSMB7Q99436 277 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 CLPBQ9H078 707 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 CPNE5Q9HCH3 593 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 OLFML3Q9NRN5 406 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 HPSEQ9Y251 543 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 INVSQ9Y283 1065 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 SCAMP3O14828 347 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 CAVIN2O95810 425 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 APPP05067 770 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms