RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 DNMT3LQ9UJW3 386 aa23.06■■□□□ 1.28
PTPRK-222ENST00000532751 FAM170BA6NMN3 283 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 SPECC1L-ADORA2AF8WAN1 911 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 PI15O43692 258 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 NFATC1O95644 943 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 TBX18O95935 607 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 CLCN1P35523 988 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 ACADSBP45954 432 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 NR1H3Q13133 447 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 EML3Q32P44 896 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 FILIP1LQ4L180 1135 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 FAM71AQ8IYT1 594 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 ZFRQ96KR1 1074 aaKnown RBP23.05■■□□□ 1.28
PTPRK-222ENST00000532751 NAA15Q9BXJ9 866 aaKnown RBP23.05■■□□□ 1.28
PTPRK-222ENST00000532751 ST7Q9NRC1 585 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 FAM207AQ9NSI2 230 aaPredicted RBP23.05■■□□□ 1.28
PTPRK-222ENST00000532751 TBC1D14Q9P2M4 693 aa23.05■■□□□ 1.28
PTPRK-222ENST00000532751 F5P12259 2224 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 E2F8A0AVK6 867 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 FBXO21O94952 628 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 ARSAP15289 507 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 CTHP32929 405 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 KRT9P35527 623 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 SOX9P48436 509 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 IQCB1Q15051 598 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 SYCP1Q15431 976 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 DENND1BQ6P3S1 775 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 RSRC2Q7L4I2 434 aaKnown RBP23.04■■□□□ 1.28
PTPRK-222ENST00000532751 APTXQ7Z2E3 356 aaKnown RBP23.04■■□□□ 1.28
PTPRK-222ENST00000532751 NEK11Q8NG66 645 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 STK32AQ8WU08 396 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 IRGQQ8WZA9 623 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 GOLGA1Q92805 767 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 GANQ9H2C0 597 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 ECT2Q9H8V3 914 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 LSM7Q9UK45 103 aaKnown RBP23.04■■□□□ 1.28
PTPRK-222ENST00000532751 NUDT5Q9UKK9 219 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 NDRG2Q9UN36 371 aaKnown RBP23.04■■□□□ 1.28
PTPRK-222ENST00000532751 PCDHGC3Q9UN70 934 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 SIK3Q9Y2K2 1263 aa23.04■■□□□ 1.28
PTPRK-222ENST00000532751 DCNP07585 359 aaKnown RBP23.03■■□□□ 1.28
PTPRK-222ENST00000532751 PNMA6AP0CW24 399 aaPredicted RBP23.03■■□□□ 1.28
PTPRK-222ENST00000532751 IRF1P10914 325 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 TARSP26639 723 aaKnown RBP23.03■■□□□ 1.28
PTPRK-222ENST00000532751 MAGEA9P43362 315 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 KLK7P49862 253 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 DAOAP59103 153 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 POLR2FP61218 127 aaKnown RBP23.03■■□□□ 1.28
PTPRK-222ENST00000532751 SLC47A2Q86VL8 602 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 CCDC105Q8IYK2 499 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 EXOC4Q96A65 974 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 OTUB2Q96DC9 234 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 ERGIC2Q96RQ1 377 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 KLF16Q9BXK1 252 aaPredicted RBP23.03■■□□□ 1.28
PTPRK-222ENST00000532751 LINC00597Q9H2U6 94 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 CBX8Q9HC52 389 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 OLA1Q9NTK5 396 aaKnown RBP23.03■■□□□ 1.28
PTPRK-222ENST00000532751 RASAL2Q9UJF2 1139 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 STRIP2Q9ULQ0 834 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 CEP83Q9Y592 693 aa23.03■■□□□ 1.28
PTPRK-222ENST00000532751 F8VZ95 297 aa23.02■■□□□ 1.28
PTPRK-222ENST00000532751 PIK3R2O00459 728 aa23.02■■□□□ 1.28
PTPRK-222ENST00000532751 MDM4O15151 490 aa23.02■■□□□ 1.28
PTPRK-222ENST00000532751 SART1O43290 800 aaKnown RBP23.02■■□□□ 1.28
PTPRK-222ENST00000532751 EFEMP1Q12805 493 aa23.02■■□□□ 1.28
PTPRK-222ENST00000532751 RNF139Q8WU17 664 aa23.02■■□□□ 1.28
PTPRK-222ENST00000532751 NDRG1Q92597 394 aaKnown RBP23.02■■□□□ 1.28
PTPRK-222ENST00000532751 NOX5Q96PH1 765 aa23.02■■□□□ 1.28
PTPRK-222ENST00000532751 SPAG5Q96R06 1193 aa23.02■■□□□ 1.28
PTPRK-222ENST00000532751 PDCL3Q9H2J4 239 aa23.02■■□□□ 1.28
PTPRK-222ENST00000532751 ABCC13Q9NSE7 274 aa23.02■■□□□ 1.28
PTPRK-222ENST00000532751 MTF2Q9Y483 593 aaPredicted RBP23.02■■□□□ 1.28
PTPRK-222ENST00000532751 SHISA7A6NL88 538 aa23.01■■□□□ 1.27
PTPRK-222ENST00000532751 RPL34P49207 117 aaKnown RBP23.01■■□□□ 1.27
PTPRK-222ENST00000532751 COG7P83436 770 aa23.01■■□□□ 1.27
PTPRK-222ENST00000532751 NFKBIBQ15653 356 aa23.01■■□□□ 1.27
PTPRK-222ENST00000532751 BSPRYQ5W0U4 402 aa23.01■■□□□ 1.27
PTPRK-222ENST00000532751 BHLHA9Q7RTU4 235 aa23.01■■□□□ 1.27
PTPRK-222ENST00000532751 MIB1Q86YT6 1006 aa23.01■■□□□ 1.27
PTPRK-222ENST00000532751 MIS12Q9H081 205 aa23.01■■□□□ 1.27
PTPRK-222ENST00000532751 LHX5Q9H2C1 402 aa23.01■■□□□ 1.27
PTPRK-222ENST00000532751 NLRC4Q9NPP4 1024 aa23.01■■□□□ 1.27
PTPRK-222ENST00000532751 YJEFN3A6XGL0 299 aa23■■□□□ 1.27
PTPRK-222ENST00000532751 E7ENQ6 273 aa23■■□□□ 1.27
PTPRK-222ENST00000532751 GOLGA6L19H0YKK7 550 aa23■■□□□ 1.27
PTPRK-222ENST00000532751 GALR2O43603 387 aaPredicted RBP23■■□□□ 1.27
PTPRK-222ENST00000532751 CYP11B1P15538 503 aa23■■□□□ 1.27
PTPRK-222ENST00000532751 GJA4P35212 333 aa23■■□□□ 1.27
PTPRK-222ENST00000532751 SNX16P57768 344 aa23■■□□□ 1.27
PTPRK-222ENST00000532751 PON2Q15165 354 aa23■■□□□ 1.27
PTPRK-222ENST00000532751 DTWD2Q8NBA8 298 aa23■■□□□ 1.27
PTPRK-222ENST00000532751 SLC4A5Q9BY07 1137 aa23■■□□□ 1.27
PTPRK-222ENST00000532751 RTN4Q9NQC3 1192 aaKnown RBP23■■□□□ 1.27
PTPRK-222ENST00000532751 MARCH2Q9P0N8 246 aa23■■□□□ 1.27
PTPRK-222ENST00000532751 OTOL1A6NHN0 477 aaPredicted RBP22.99■■□□□ 1.27
PTPRK-222ENST00000532751 SCAMP3O14828 347 aaKnown RBP22.99■■□□□ 1.27
PTPRK-222ENST00000532751 GABBR2O75899 941 aa22.99■■□□□ 1.27
PTPRK-222ENST00000532751 SERPINC1P01008 464 aa22.99■■□□□ 1.27
PTPRK-222ENST00000532751 LTFP02788 710 aa22.99■■□□□ 1.27
PTPRK-222ENST00000532751 STAT1P42224 750 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms