RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 PTPN20Q4JDL3 420 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 BSPRYQ5W0U4 402 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 SPECC1LQ69YQ0 1117 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 ZNF276Q8N554 614 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 BPIFB1Q8TDL5 484 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 SH3RF2Q8TEC5 729 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 IQCDQ96DY2 449 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 NOX5Q96PH1 765 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 AGPAT1Q99943 283 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 TRMT61BQ9BVS5 477 aaKnown RBP26.03■■□□□ 1.76
USP48-214ENST00000532737 TRIM5Q9C035 493 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 KIF9Q9HAQ2 790 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 MDM4O15151 490 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 ERBB2P04626 1255 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 CYP1A1P04798 512 aaPredicted RBP26.02■■□□□ 1.76
USP48-214ENST00000532737 RALAP11233 206 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 SRFP11831 508 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 ATP5C1P36542 298 aaKnown RBP26.02■■□□□ 1.76
USP48-214ENST00000532737 FCHO2Q0JRZ9 810 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 C10orf120Q5SQS8 335 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 NAA35Q5VZE5 725 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 BTBD8Q5XKL5 378 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 FMNL3Q8IVF7 1028 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 UBALD2Q8IYN6 164 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 TTC16Q8NEE8 873 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 EDAQ92838 391 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 ZFRQ96KR1 1074 aaKnown RBP26.02■■□□□ 1.76
USP48-214ENST00000532737 NACA2Q9H009 215 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 KCNH6Q9H252 994 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.02■■□□□ 1.76
USP48-214ENST00000532737 KMT2EQ8IZD2 1858 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 MYO16Q9Y6X6 1858 aa26.02■■□□□ 1.76
USP48-214ENST00000532737 LEFTY2O00292 366 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 GDI1P31150 447 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 ZBED6P86452 979 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 USP4Q13107 963 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 ZNF77Q15935 545 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 KLHDC10Q6PID8 442 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 YAF2Q8IY57 180 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 NUP210Q8TEM1 1887 aaPredicted RBP26.01■■□□□ 1.75
USP48-214ENST00000532737 CPA5Q8WXQ8 436 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 EDEM1Q92611 657 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 SYT11Q9BT88 431 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 SLC2A4RGQ9NR83 387 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 GKN1Q9NS71 199 aa26.01■■□□□ 1.75
USP48-214ENST00000532737 LUC7L2Q9Y383 392 aaKnown RBP26.01■■□□□ 1.75
USP48-214ENST00000532737 TCF3P15923 654 aa26■■□□□ 1.75
USP48-214ENST00000532737 CASP14P31944 242 aa26■■□□□ 1.75
USP48-214ENST00000532737 TRIM72Q6ZMU5 477 aa26■■□□□ 1.75
USP48-214ENST00000532737 ZNF397Q8NF99 534 aaPredicted RBP26■■□□□ 1.75
USP48-214ENST00000532737 OLIG1Q8TAK6 271 aa26■■□□□ 1.75
USP48-214ENST00000532737 PIWIL1Q96J94 861 aaKnown RBP26■■□□□ 1.75
USP48-214ENST00000532737 ZFYVE19Q96K21 471 aa26■■□□□ 1.75
USP48-214ENST00000532737 KLF16Q9BXK1 252 aaPredicted RBP26■■□□□ 1.75
USP48-214ENST00000532737 BRD9Q9H8M2 597 aa26■■□□□ 1.75
USP48-214ENST00000532737 DNMT3LQ9UJW3 386 aa26■■□□□ 1.75
USP48-214ENST00000532737 ZDBF2Q9HCK1 2354 aa26■■□□□ 1.75
USP48-214ENST00000532737 ZNF263O14978 683 aa25.99■■□□□ 1.75
USP48-214ENST00000532737 SART1O43290 800 aaKnown RBP25.99■■□□□ 1.75
USP48-214ENST00000532737 LTFP02788 710 aa25.99■■□□□ 1.75
USP48-214ENST00000532737 SKILP12757 684 aa25.99■■□□□ 1.75
USP48-214ENST00000532737 PRKCIP41743 596 aa25.99■■□□□ 1.75
USP48-214ENST00000532737 MTF1Q14872 753 aa25.99■■□□□ 1.75
USP48-214ENST00000532737 RSRC2Q7L4I2 434 aaKnown RBP25.99■■□□□ 1.75
USP48-214ENST00000532737 ERICH1Q86X53 443 aa25.99■■□□□ 1.75
USP48-214ENST00000532737 IPO4Q8TEX9 1081 aaKnown RBP25.99■■□□□ 1.75
USP48-214ENST00000532737 WBP2Q969T9 261 aa25.99■■□□□ 1.75
USP48-214ENST00000532737 CDK5RAP1Q96SZ6 601 aaKnown RBP25.99■■□□□ 1.75
USP48-214ENST00000532737 NUCKS1Q9H1E3 243 aaKnown RBP25.99■■□□□ 1.75
USP48-214ENST00000532737 SYNCQ9H7C4 482 aa25.99■■□□□ 1.75
USP48-214ENST00000532737 ABCC13Q9NSE7 274 aa25.99■■□□□ 1.75
USP48-214ENST00000532737 THG1LQ9NWX6 298 aaKnown RBP25.99■■□□□ 1.75
USP48-214ENST00000532737 CFAP97Q9P2B7 532 aa25.99■■□□□ 1.75
USP48-214ENST00000532737 CHADO15335 359 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 FYNP06241 537 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 UNGP13051 313 aaPredicted RBP25.98■■□□□ 1.75
USP48-214ENST00000532737 SNX16P57768 344 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 NHLH1Q02575 133 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 EFEMP1Q12805 493 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 TAF5Q15542 800 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 ARHGAP29Q52LW3 1261 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 OR6B2Q6IFH4 312 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 FAM183BPQ6ZVS7 135 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 TADA2BQ86TJ2 420 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 ALYREFQ86V81 257 aaKnown RBP25.98■■□□□ 1.75
USP48-214ENST00000532737 SLC30A5Q8TAD4 765 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 SYN2Q92777 582 aaPredicted RBP25.98■■□□□ 1.75
USP48-214ENST00000532737 ASIC4Q96FT7 647 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 HAUS4Q9H6D7 363 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 RASAL2Q9UJF2 1139 aa25.98■■□□□ 1.75
USP48-214ENST00000532737 ARNTLO00327 626 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 GABRB2P47870 512 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 ZNF75DP51815 510 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 KLHL30Q0D2K2 578 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 CLEC16AQ2KHT3 1053 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 C2CD6Q53TS8 623 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 IER5LQ5T953 404 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 ZNF571Q7Z3V5 609 aaPredicted RBP25.97■■□□□ 1.75
USP48-214ENST00000532737 BMP8AQ7Z5Y6 402 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 MIB1Q86YT6 1006 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms