RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 AMPD1P23109 780 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 NAPEPLDQ6IQ20 393 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 C17orf99Q6UX52 265 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 JAMLQ86YT9 394 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 ZBED3Q96IU2 234 aaPredicted RBP16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 TCF25Q9BQ70 676 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 NUP98P52948 1817 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 CCDC195A0A1B0GUA6 201 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 OR6C75A6NL08 312 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 NVLO15381 856 aaKnown RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 ANXA9O76027 345 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 PKN2Q16513 984 aaKnown RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 PPP1R26Q5T8A7 1209 aaPredicted RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 PTRHD1Q6GMV3 140 aaKnown RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 PSRC1Q6PGN9 363 aaPredicted RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 KRT35Q92764 455 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 ARHGEF38Q9NXL2 777 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 GTSE1Q9NYZ3 720 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 TRUB2O95900 331 aaKnown RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 COPS2P61201 443 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 SPOCD1Q6ZMY3 1216 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 FAM35AQ86V20 835 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 DENND1CQ8IV53 801 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 MAB21L3Q8N8X9 362 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 EPS8L1Q8TE68 723 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 SMG7Q92540 1137 aaKnown RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 UBXN6Q9BZV1 441 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 RRN3Q9NYV6 651 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 FBXL5Q9UKA1 691 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 CST3P01034 146 aaPredicted RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 NAA30Q147X3 362 aaPredicted RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 TBC1D1Q86TI0 1168 aaPredicted RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 TOP6BLQ8N6T0 577 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 FBXO22Q8NEZ5 403 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 THOC1Q96FV9 657 aaKnown RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 AP5Z1O43299 807 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 ESRRBO95718 433 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 RALBP11234 206 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 GET4Q7L5D6 327 aaPredicted RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 ADCK2Q7Z695 626 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 ANKRD52Q8NB46 1076 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 ZNF669Q96BR6 464 aaPredicted RBP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 RBM22Q9NW64 420 aaKnown RBP eCLIP16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 DNMT3LQ9UJW3 386 aa16.28■□□□□ 0.2
PPFIA1-222ENST00000532504 CFAP99D6REC4 459 aa16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 GJA9P57773 515 aa16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 PDAP1Q13442 181 aaKnown RBP16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 FNDC3BQ53EP0 1204 aaKnown RBP16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 RAP1GAP2Q684P5 730 aa16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 CACNA2D3Q8IZS8 1091 aa16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 NID2Q14112 1375 aa16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 GOLGA8RI6L899 631 aa16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 AP3B1O00203 1094 aa16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 B4GALT4O60513 344 aa16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 SMAD3P84022 425 aaKnown RBP16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 TIGD7Q6NT04 549 aaPredicted RBP16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 FAM228AQ86W67 206 aa16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 DDX42Q86XP3 938 aaKnown RBP eCLIP16.27■□□□□ 0.2
PPFIA1-222ENST00000532504 COBLL1Q53SF7 1204 aa16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 FAM183BPQ6ZVS7 135 aa16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 RMDN2Q96LZ7 410 aa16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 CARD9Q9H257 536 aa16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 TAS2R14Q9NYV8 317 aa16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 CACNG4Q9UBN1 327 aa16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 EPHB6O15197 1021 aa16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 FBXO46Q6PJ61 603 aaPredicted RBP16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 PRSS55Q6UWB4 352 aaPredicted RBP16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 C1orf127Q8N9H9 656 aa16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 SEMA4DQ92854 862 aa16.27■□□□□ 0.19
PPFIA1-222ENST00000532504 MIPP30301 263 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 SZRD1Q7Z422 152 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 TMEM121Q9BTD3 319 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 DCLK3Q9C098 648 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 SIK3Q9Y2K2 1263 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 PDE4DIPQ5VU43 2346 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 RAD51CO43502 376 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 MAP4P27816 1152 aaKnown RBP16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 COILP38432 576 aaPredicted RBP16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 MIIPQ5JXC2 388 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 ALS2CLQ60I27 953 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 SYDE1Q6ZW31 735 aaPredicted RBP16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 ELMO2Q96JJ3 720 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 B3GALT6Q96L58 329 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 GEMP55040 296 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 CENPCQ03188 943 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 MARC1Q5VT66 337 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 NUGGCQ68CJ6 796 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 BCAS4Q8TDM0 211 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 MAML1Q92585 1016 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 ZIC5Q96T25 663 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 DERAQ9Y315 318 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 NUP188Q5SRE5 1749 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 TLR5O60602 858 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 F2P00734 622 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 SERPIND1P05546 499 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 CHRM3P20309 590 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 ITGA8P53708 1063 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms