RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 UNKLQ9H9P5 680 aaKnown RBP3.41□□□□□ -1.86
CD44-234ENST00000531873 ALG13Q9NP73 1137 aaKnown RBP3.41□□□□□ -1.86
CD44-234ENST00000531873 SMC4Q9NTJ3 1288 aa3.41□□□□□ -1.86
CD44-234ENST00000531873 RNF181Q9P0P0 153 aa3.41□□□□□ -1.86
CD44-234ENST00000531873 KCND3Q9UK17 655 aa3.41□□□□□ -1.86
CD44-234ENST00000531873 SLC13A4Q9UKG4 626 aa3.41□□□□□ -1.86
CD44-234ENST00000531873 SLC27A6Q9Y2P4 619 aa3.41□□□□□ -1.86
CD44-234ENST00000531873 MAP3K2Q9Y2U5 619 aa3.41□□□□□ -1.86
CD44-234ENST00000531873 FPGT-TNNI3KV9GXZ4 949 aa3.41□□□□□ -1.86
CD44-234ENST00000531873 LOC105369274A0A096LPK9 316 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 LOC102723532A0A0G2JNH3 316 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 SLC38A8A6NNN8 435 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 E7EVH7 732 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 TRIAP1O43715 76 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 NCR1O76036 304 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 SCAF4O95104 1147 aaKnown RBP3.4□□□□□ -1.87
CD44-234ENST00000531873 HLA-DOAP06340 250 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 LDHCP07864 332 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 CNPP09543 421 aaKnown RBP3.4□□□□□ -1.87
CD44-234ENST00000531873 PPP3CBP16298 524 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 RXRAP19793 462 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 EPHA3P29320 983 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 SERPINA4P29622 427 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 ZEB1P37275 1124 aaPredicted RBP3.4□□□□□ -1.87
CD44-234ENST00000531873 CASP2P42575 452 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 AARSP49588 968 aaKnown RBP eCLIP3.4□□□□□ -1.87
CD44-234ENST00000531873 GATMP50440 423 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 CDK7P50613 346 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 HNRNPMP52272 730 aaKnown RBP eCLIP3.4□□□□□ -1.87
CD44-234ENST00000531873 VAV2P52735 878 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 HMGA2P52926 109 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 FAM3BP58499 235 aaPredicted RBP3.4□□□□□ -1.87
CD44-234ENST00000531873 TIRAPP58753 221 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 HHEXQ03014 270 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 FPGSQ05932 587 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 SF3A3Q12874 501 aaKnown RBP eCLIP3.4□□□□□ -1.87
CD44-234ENST00000531873 TRPC3Q13507 836 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 SLC12A1Q13621 1099 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 TOB2Q14106 344 aaPredicted RBP3.4□□□□□ -1.87
CD44-234ENST00000531873 DLGAP5Q15398 846 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 BEAN1Q3B7T3 259 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 TMEM196Q5HYL7 178 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 FAM90A2PQ658T7 463 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 SP5Q6BEB4 398 aaPredicted RBP3.4□□□□□ -1.87
CD44-234ENST00000531873 DGAT2L7PQ6IED9 249 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 CLEC9AQ6UXN8 241 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 TRABD2AQ86V40 505 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 IZUMO1Q8IYV9 350 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 OR4N4Q8N0Y3 316 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 SUPT20HQ8NEM7 779 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 OSCP1Q8WVF1 389 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 WDR60Q8WVS4 1066 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 FUBP1Q96AE4 644 aaKnown RBP3.4□□□□□ -1.87
CD44-234ENST00000531873 RNF31Q96EP0 1072 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 WDYHV1Q96HA8 205 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 PAAF1Q9BRP4 392 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 TTPALQ9BTX7 342 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 INO80BQ9C086 356 aaPredicted RBP3.4□□□□□ -1.87
CD44-234ENST00000531873 AMBRA1Q9C0C7 1298 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 ABHD16BQ9H3Z7 469 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 CD248Q9HCU0 757 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 TMEM74BQ9NUR3 256 aa3.4□□□□□ -1.87
CD44-234ENST00000531873 KAT6AQ92794 2004 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 M0QZQ0 153 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 PPM1DO15297 605 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 CYP27B1O15528 508 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 CTIFO43310 598 aaKnown RBP3.39□□□□□ -1.87
CD44-234ENST00000531873 RNASEH2AO75792 299 aaKnown RBP3.39□□□□□ -1.87
CD44-234ENST00000531873 KRT38O76015 456 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 WDR47O94967 919 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 HEXIM1O94992 359 aaKnown RBP3.39□□□□□ -1.87
CD44-234ENST00000531873 FSHBP01225 129 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 HNRNPA1P09651 372 aaKnown RBP eCLIP3.39□□□□□ -1.87
CD44-234ENST00000531873 NR4A1P22736 598 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 YY1P25490 414 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 PRKAR1BP31321 381 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 HIBADHP31937 336 aaKnown RBP3.39□□□□□ -1.87
CD44-234ENST00000531873 ELF1P32519 619 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 PBX1P40424 430 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 EIF5P55010 431 aaKnown RBP3.39□□□□□ -1.87
CD44-234ENST00000531873 VAMP2P63027 116 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 MAPK7Q13164 816 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 CRHR2Q13324 411 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 PDCLQ13371 301 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 CSHL1Q14406 222 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 ICAM4Q14773 271 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 SLC9C2Q5TAH2 1124 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 SYT13Q7L8C5 426 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 MAVSQ7Z434 540 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 FSTL5Q8N475 847 aaPredicted RBP3.39□□□□□ -1.87
CD44-234ENST00000531873 LRRC71Q8N4P6 559 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 TMEM57Q8N5G2 664 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 C11orf44Q8N8P7 122 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 SLC22A17Q8WUG5 538 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 ATRIPQ8WXE1 791 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 SOCS4Q8WXH5 440 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 GOLGA1Q92805 767 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 RRP36Q96EU6 259 aaKnown RBP3.39□□□□□ -1.87
CD44-234ENST00000531873 BOD1Q96IK1 185 aa3.39□□□□□ -1.87
CD44-234ENST00000531873 C1QTNF3Q9BXJ4 246 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms