RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 EGFLAMQ63HQ2 1017 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 TRMT11Q7Z4G4 463 aaKnown RBP18.34■□□□□ 0.53
PKP3-208ENST00000531857 SLC41A1Q8IVJ1 513 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 ZMIZ2Q8NF64 920 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 CEP76Q8TAP6 659 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 SYAP1Q96A49 352 aaPredicted RBP18.34■□□□□ 0.53
PKP3-208ENST00000531857 DUSP9Q99956 384 aaKnown RBP18.34■□□□□ 0.53
PKP3-208ENST00000531857 LRRC27Q9C0I9 530 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 SDCBP2Q9H190 292 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 CD248Q9HCU0 757 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 DMAP1Q9NPF5 467 aaPredicted RBP18.34■□□□□ 0.53
PKP3-208ENST00000531857 MSRB2Q9Y3D2 182 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 STARD13Q9Y3M8 1113 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 NBEAQ8NFP9 2946 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 ATP8B3O60423 1300 aa18.33■□□□□ 0.53
PKP3-208ENST00000531857 FAM92AA1XBS5 289 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 GREM1O60565 184 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 PHACTR2O75167 634 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 BEST1O76090 585 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 CASP1P29466 404 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 EHHADHQ08426 723 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 STK38Q15208 465 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 CNNM4Q6P4Q7 775 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 SLC36A4Q6YBV0 504 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 SCARA5Q6ZMJ2 495 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 ACOT1Q86TX2 421 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 FUKQ8N0W3 1084 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 HDDC3Q8N4P3 179 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 MINDY1Q8N5J2 469 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 LINC00301Q8NCQ3 95 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 SMARCD1Q96GM5 515 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 SMOQ99835 787 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 CD93Q9NPY3 652 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 PLXNB3Q9ULL4 1909 aa18.33■□□□□ 0.52
PKP3-208ENST00000531857 UBE4BO95155 1302 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 NEDD8-MDP1E9PL57 170 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 OPHN1O60890 802 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 AP1G2O75843 785 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 TBX18O95935 607 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 CD59P13987 128 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 NDUFV2P19404 249 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 ORC1Q13415 861 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 PREPLQ4J6C6 727 aaPredicted RBP18.32■□□□□ 0.52
PKP3-208ENST00000531857 GRAMD4Q6IC98 578 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 TOGARAM2Q6ZUX3 1019 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 CHCHD4Q8N4Q1 142 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 C7orf25Q9BPX7 421 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 NACA2Q9H009 215 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 SLC6A17Q9H1V8 727 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 CUEDC2Q9H467 287 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 VRTNQ9H8Y1 702 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 KRT82Q9NSB4 513 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 DNAJC17Q9NVM6 304 aaKnown RBP18.32■□□□□ 0.52
PKP3-208ENST00000531857 TFIP11Q9UBB9 837 aaKnown RBP18.32■□□□□ 0.52
PKP3-208ENST00000531857 CYP8B1Q9UNU6 501 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 RAD54BQ9Y620 910 aa18.32■□□□□ 0.52
PKP3-208ENST00000531857 PTPRBP23467 1997 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 ADAMTS20P59510 1910 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 PRRT4C9JH25 899 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 ARHGAP33O14559 1287 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 TLR5O60602 858 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 CCDC130P13994 396 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 SNRPFP62306 86 aaKnown RBP18.31■□□□□ 0.52
PKP3-208ENST00000531857 AMPD3Q01432 767 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 RING1Q06587 406 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 BIRC3Q13489 604 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 ZNF699Q32M78 642 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 ZNF667Q5HYK9 610 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 SHC4Q6S5L8 630 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 TPGS1Q6ZTW0 290 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 NUDT18Q6ZVK8 323 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 HTR3DQ70Z44 454 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 CHPFQ8IZ52 775 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 TRIML1Q8N9V2 468 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 IPO4Q8TEX9 1081 aaKnown RBP18.31■□□□□ 0.52
PKP3-208ENST00000531857 TNIP3Q96KP6 325 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 HSPA12BQ96MM6 686 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 CAMK1GQ96NX5 476 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 BBS2Q9BXC9 721 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 KLF16Q9BXK1 252 aaPredicted RBP18.31■□□□□ 0.52
PKP3-208ENST00000531857 BLZF1Q9H2G9 400 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 SLC39A2Q9NP94 309 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 COMMD8Q9NX08 183 aa18.31■□□□□ 0.52
PKP3-208ENST00000531857 LRRIQ3A6PVS8 624 aaPredicted RBP18.3■□□□□ 0.52
PKP3-208ENST00000531857 TAF4O00268 1085 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 SPTLC2O15270 562 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 CACNG3O60359 315 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 EXOC3O60645 756 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 CLSTN1O94985 981 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 VNN1O95497 513 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 TYRP14679 529 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 NCOA4Q13772 614 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 BMT2Q1RMZ1 405 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 UNC13DQ70J99 1090 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 C12orf56Q8IXR9 622 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 IQUBQ8NA54 791 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 SLC2A14Q8TDB8 520 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 GABRG3Q99928 467 aa18.3■□□□□ 0.52
PKP3-208ENST00000531857 ZSCAN16Q9H4T2 348 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms