RNA–Protein interactions for RNA: ENST00000531691.5

TXNRD1-223, Transcript of thioredoxin reductase 1, human

TSL 2

Gene TXNRD1, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TXNRD1-223	ENST00000531691	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
TXNRD1-223	ENST00000531691	RAD54B	Q9Y620	910 aa		11.87	□□□□□ -0.51
TXNRD1-223	ENST00000531691	MYH11	P35749	1972 aa		11.87	□□□□□ -0.51
TXNRD1-223	ENST00000531691	TCHH	Q07283	1943 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	TEX51	A0A1B0GUA7	166 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	METTL12	A8MUP2	240 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	NEDD8-MDP1	E9PL57	170 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	COCH	O43405	550 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CDK4	P11802	303 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	JUP	P14923	745 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ITPKB	P27987	946 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ADSS	P30520	456 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	HNF1B	P35680	557 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	GNL1	P36915	607 aa	Predicted RBP	11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	EIF2S3	P41091	472 aa	Known RBP	11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	AFF3	P51826	1226 aa	Known RBP	11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ZNF132	P52740	706 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	IFRD2	Q12894	506 aa	Predicted RBP	11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	E2F5	Q15329	346 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	TEAD4	Q15561	434 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	RILPL1	Q5EBL4	403 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CCDC83	Q8IWF9	413 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	NUP93	Q8N1F7	819 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	FBXO32	Q969P5	355 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ANKRD36BP1	Q96IX9	119 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	AK8	Q96MA6	479 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	FCRL3	Q96P31	734 aa	Predicted RBP	11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	FIZ1	Q96SL8	496 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	MMS19	Q96T76	1030 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	NUP58	Q9BVL2	599 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	BBS2	Q9BXC9	721 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ELOVL4	Q9GZR5	314 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	SLC6A17	Q9H1V8	727 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	SNX25	Q9H3E2	840 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.86	□□□□□ -0.51	4e-13	■■■■■ 95.3
TXNRD1-223	ENST00000531691	LIMCH1	Q9UPQ0	1083 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	AK5	Q9Y6K8	562 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	KNL1	Q8NG31	2342 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CEP192	Q8TEP8	1941 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ANAPC1	Q9H1A4	1944 aa		11.86	□□□□□ -0.51
TXNRD1-223	ENST00000531691		A0A1B0GVT2	93 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	PLK4	O00444	970 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	NPC1	O15118	1278 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	TRIM24	O15164	1050 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CACNG3	O60359	315 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	SYNCRIP	O60506	623 aa	Known RBP	11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	TNNC2	P02585	160 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ACADM	P11310	421 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	TYR	P14679	529 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	WARS	P23381	471 aa	Known RBP	11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	DGKG	P49619	791 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	TUB	P50607	506 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CFHR1	Q03591	330 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	GOLGA8F	Q08AF8	430 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	GOLGA8DP	Q0D2H9	430 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	SF3A1	Q15459	793 aa	Known RBP	11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	MDH1B	Q5I0G3	518 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	LARP1B	Q659C4	914 aa	Known RBP	11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	DHRS13	Q6UX07	377 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ZNF720	Q7Z2F6	126 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	GPR155	Q7Z3F1	870 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	LIMS2	Q7Z4I7	341 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CXorf38	Q8TB03	319 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	KBTBD7	Q8WVZ9	684 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	PRCC	Q92733	491 aa	Predicted RBP	11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	SAAL1	Q96ER3	474 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ACCS	Q96QU6	501 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	PCED1A	Q9H1Q7	454 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CD93	Q9NPY3	652 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	USP36	Q9P275	1121 aa	Known RBP	11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	EIF2B4	Q9UI10	523 aa	Known RBP	11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	PTPRB	P23467	1997 aa		11.85	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CABIN1	Q9Y6J0	2220 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	PRRT4	C9JH25	899 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	FAM163B	P0C2L3	166 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	GART	P22102	1010 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CSNK1E	P49674	416 aa	Known RBP	11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	CCT8	P50990	548 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	TPMT	P51580	245 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	BNC1	Q01954	994 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	SEMG2	Q02383	582 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ST3GAL1	Q11201	340 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	MCM6	Q14566	821 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	PTPRN	Q16849	979 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	KIF19	Q2TAC6	998 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	FUT11	Q495W5	492 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	SNX30	Q5VWJ9	437 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	SYCP3	Q8IZU3	236 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	NOC3L	Q8WTT2	800 aa	Known RBP	11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	UCMA	Q8WVF2	138 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	RAD54L	Q92698	747 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	SIPA1	Q96FS4	1042 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	ZFR	Q96KR1	1074 aa	Known RBP	11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	MTMR12	Q9C0I1	747 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	MRPL44	Q9H9J2	332 aa	Known RBP	11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	FTSJ1	Q9UET6	329 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	SIX4	Q9UIU6	781 aa		11.84	□□□□□ -0.51
TXNRD1-223	ENST00000531691	LSM7	Q9UK45	103 aa	Known RBP	11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms