RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 MAGEA9P43362 315 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 ASPAP45381 313 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 CD97P48960 835 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 NUCB2P80303 420 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 AMPD3Q01432 767 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 STK4Q13043 487 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 CSRP2Q16527 193 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 FAM78AQ5JUQ0 283 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 PAOXQ6QHF9 649 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 Q6ZS52 159 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 EPM2AIP1Q7L775 607 aaPredicted RBP7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 APBB1IPQ7Z5R6 666 aaPredicted RBP7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 SHISA5Q8N114 240 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 CELF5Q8N6W0 485 aaKnown RBP7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 ZNF507Q8TCN5 953 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 POMGNT1Q8WZA1 660 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 SAAL1Q96ER3 474 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 ZSWIM3Q96MP5 696 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 NELL2Q99435 816 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 CBWD1Q9BRT8 395 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 YIPF2Q9BWQ6 316 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 SMOC1Q9H4F8 434 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 C12orf49Q9H741 205 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 BRD9Q9H8M2 597 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 RPF1Q9H9Y2 349 aaKnown RBP7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 KRT82Q9NSB4 513 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 AGO2Q9UKV8 859 aaKnown RBP7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 ATP6V1DQ9Y5K8 247 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 LAMA5O15230 3695 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 FANCMQ8IYD8 2048 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 NCANO14594 1321 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 WDFY3Q8IZQ1 3526 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 A0A1W2PQ27 194 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 A0A1W2PQ64 194 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 A0A1W2PQD8 194 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 PODXLO00592 558 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 CLIC2O15247 247 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 TMPRSS2O15393 492 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 TGFB1I1O43294 461 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 ZNF202O95125 648 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 MED26O95402 600 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 GJA1P17302 382 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 SPINK2P20155 84 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 RAB6AP20340 208 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 SCP2P22307 547 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 NME2P22392 152 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 ARNTP27540 789 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 TKTP29401 623 aaKnown RBP7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 VIPR2P41587 438 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 CCR2P41597 374 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 SYKP43405 635 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 CXCL12P48061 93 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 SOX9P48436 509 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 CREMQ03060 361 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 RAB33AQ14088 237 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 JADE1Q6IE81 842 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 SLFN12LQ6IEE8 588 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 UNC13DQ70J99 1090 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 NELFCDQ8IXH7 590 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 GPR65Q8IYL9 337 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 CEP57L1Q8IYX8 460 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 SYCP3Q8IZU3 236 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 FSIP1Q8NA03 581 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 TTC8Q8TAM2 541 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 SCFD1Q8WVM8 642 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 FAM3CQ92520 227 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 BORCS6Q96GS4 357 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 FAM213AQ9BRX8 229 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 FAM126AQ9BYI3 521 aaPredicted RBP7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 LRRC27Q9C0I9 530 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 ACSS3Q9H6R3 686 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 PLEKHA5Q9HAU0 1116 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 MRPS17Q9Y2R5 130 aaKnown RBP7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 CDY1Q9Y6F8 540 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 PIAS3Q9Y6X2 628 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 AKAP13Q12802 2813 aa7.54□□□□□ -1.2
TRIM53CP-201ENST00000531490 NOTCH4Q99466 2003 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 PVALEFA0A1B0GWK0 134 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 TMEM189-UBE2V1I3L0A0 370 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 K7ESF4 209 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 ENC1O14682 589 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 LRP3O75074 770 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 FBXO24O75426 580 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 TOP3BO95985 862 aaKnown RBP7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 F13BP05160 661 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 CHRNB1P11230 501 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 GARTP22102 1010 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 CCNE1P24864 410 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 GDI1P31150 447 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 HOXA9P31269 272 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 RPL9P32969 192 aaKnown RBP7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 CDR1P51861 262 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 POSTNQ15063 836 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 AASDHQ4L235 1098 aaPredicted RBP7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 FAM26FQ5R3K3 315 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 SPATA1Q5VX52 437 aa7.53□□□□□ -1.2
TRIM53CP-201ENST00000531490 IL31Q6EBC2 164 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms