RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ZNF75CPQ92670 426 aaPredicted RBP17.9■□□□□ 0.46
BRCA2-204ENST00000530893 CENPIQ92674 756 aaPredicted RBP17.9■□□□□ 0.46
BRCA2-204ENST00000530893 APBB2Q92870 758 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 C11orf84Q9BUA3 381 aaPredicted RBP17.9■□□□□ 0.46
BRCA2-204ENST00000530893 RAB6CQ9H0N0 254 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 TXLNGQ9NUQ3 528 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 GTF2IRD1Q9UHL9 959 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 BTBD19C9JJ37 291 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 KBTBD13C9JR72 458 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 TRDMT1O14717 391 aaKnown RBP17.89■□□□□ 0.46
BRCA2-204ENST00000530893 XPOTO43592 962 aaKnown RBP17.89■□□□□ 0.46
BRCA2-204ENST00000530893 UNC5CO95185 931 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 MT-ND3P03897 115 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 INHBAP08476 426 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 PNPLA4P41247 253 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 ACADSBP45954 432 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 IRF5Q13568 498 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 SOWAHAQ2M3V2 549 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 FYB2Q5VWT5 728 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 C9orf57Q5W0N0 161 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 TAB3Q8N5C8 712 aaPredicted RBP17.89■□□□□ 0.46
BRCA2-204ENST00000530893 MCUQ8NE86 351 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 LRRC37BQ96QE4 947 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 FAM49BQ9NUQ9 324 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 SETD4Q9NVD3 440 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 TUBGCP4Q9UGJ1 667 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 HEY1Q9Y5J3 304 aa17.89■□□□□ 0.46
BRCA2-204ENST00000530893 PDCD11Q14690 1871 aaKnown RBP17.89■□□□□ 0.45
BRCA2-204ENST00000530893 A8MXQ7 604 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 RBL1P28749 1068 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 PTK7Q13308 1070 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 FBXO47Q5MNV8 452 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 IGDCC3Q8IVU1 814 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 TCP10LQ8TDR4 215 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 ZNF560Q96MR9 790 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 TRIM6Q9C030 488 aaPredicted RBP17.89■□□□□ 0.45
BRCA2-204ENST00000530893 NRDE2Q9H7Z3 1164 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 PRDM16Q9HAZ2 1276 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 SLCO1B3Q9NPD5 702 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 ETNK2Q9NVF9 386 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 ZNF180Q9UJW8 692 aa17.89■□□□□ 0.45
BRCA2-204ENST00000530893 CCL15-CCL14A0A0B4J2E2 113 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 A6NJR5 290 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 PPEF2O14830 753 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 DARSP14868 501 aaKnown RBP17.88■□□□□ 0.45
BRCA2-204ENST00000530893 YWHAGP61981 247 aaKnown RBP eCLIP17.88■□□□□ 0.45
BRCA2-204ENST00000530893 SLC18A2Q05940 514 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 CCL15Q16663 113 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 KBTBD12Q3ZCT8 623 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 FAM228AQ86W67 206 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 SPOCK2Q92563 424 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 HSFY1Q96LI6 401 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 EIF2AQ9BY44 585 aaKnown RBP17.88■□□□□ 0.45
BRCA2-204ENST00000530893 NOD2Q9HC29 1040 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 CD248Q9HCU0 757 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 GDAP2Q9NXN4 497 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 NME7Q9Y5B8 376 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 SCN4AP35499 1836 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 MBLAC1A4D2B0 266 aaPredicted RBP17.88■□□□□ 0.45
BRCA2-204ENST00000530893 IGF2BP3O00425 579 aaKnown RBP eCLIP17.88■□□□□ 0.45
BRCA2-204ENST00000530893 PIRO00625 290 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 GCATO75600 419 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 F2P00734 622 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 CYP2F1P24903 491 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 NRLP54845 237 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 YWHAZP63104 245 aaKnown RBP17.88■□□□□ 0.45
BRCA2-204ENST00000530893 PNMA8AQ86V59 439 aaPredicted RBP17.88■□□□□ 0.45
BRCA2-204ENST00000530893 SLC26A11Q86WA9 606 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 CHSY1Q86X52 802 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 GPATCH2LQ9NWQ4 482 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 SLC5A4Q9NY91 659 aa17.88■□□□□ 0.45
BRCA2-204ENST00000530893 DCAF8L1A6NGE4 600 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 LPXNO60711 386 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 TROVE2P10155 538 aaKnown RBP eCLIP17.87■□□□□ 0.45
BRCA2-204ENST00000530893 ADRA1DP25100 572 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 L1CAMP32004 1257 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 KCNJ2P63252 427 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 CA9Q16790 459 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 LGSNQ5TDP6 509 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 STRADAQ7RTN6 431 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 OTOAQ7RTW8 1153 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 PLEKHH3Q7Z736 793 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 ZNF276Q8N554 614 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 C10orf82Q8WW14 230 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 APOPT1Q96IL0 206 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 TACO1Q9BSH4 297 aaKnown RBP17.87■□□□□ 0.45
BRCA2-204ENST00000530893 FAM49AQ9H0Q0 323 aaPredicted RBP17.87■□□□□ 0.45
BRCA2-204ENST00000530893 GINS2Q9Y248 185 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 SRCAPQ6ZRS2 3230 aa17.87■□□□□ 0.45
BRCA2-204ENST00000530893 ZNF236Q9UL36 1845 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 C2CD2LO14523 706 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 GABBR2O75899 941 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 RECQL4O94761 1208 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 DHRS4L1P0CG22 281 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 TPSB2P20231 275 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 PRKCHP24723 683 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 TPSAB1Q15661 275 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 FAM110CQ1W6H9 321 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 SLC45A4Q5BKX6 768 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 PPP6R3Q5H9R7 873 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms