RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 YWHAGP61981 247 aaKnown RBP eCLIP14.58□□□□□ -0.07
NXF1-207ENST00000530875 ATP11AP98196 1134 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 TWF1Q12792 350 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 CDO1Q16878 200 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 DCAF6Q58WW2 860 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 SYPL2Q5VXT5 272 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 BSPRYQ5W0U4 402 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 CC2D1AQ6P1N0 951 aaPredicted RBP14.58□□□□□ -0.07
NXF1-207ENST00000530875 SLC7A14Q8TBB6 771 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 EDEM1Q92611 657 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 CD101Q93033 1021 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 HES6Q96HZ4 224 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 SLC2A13Q96QE2 648 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 DDX23Q9BUQ8 820 aaKnown RBP14.58□□□□□ -0.07
NXF1-207ENST00000530875 CHD7Q9P2D1 2997 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 FBXW11Q9UKB1 542 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 SAR1BQ9Y6B6 198 aa14.58□□□□□ -0.07
NXF1-207ENST00000530875 CAPN9O14815 690 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 SEC31AO94979 1220 aaKnown RBP14.58□□□□□ -0.08
NXF1-207ENST00000530875 NCAM1P13591 858 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 TCF4P15884 667 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 MARCKSL1P49006 195 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 CLCN4P51793 760 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 TAS2R40P59535 323 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 TUBB4BP68371 445 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 RAB6CQ53S08 254 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 PDE12Q6L8Q7 609 aaKnown RBP14.58□□□□□ -0.08
NXF1-207ENST00000530875 SCD5Q86SK9 330 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 ARFGAP1Q8N6T3 406 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 KREMEN2Q8NCW0 462 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 KRT35Q92764 455 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 FBXO32Q969P5 355 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 CEP295NLQ96MC4 621 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 RAB6CQ9H0N0 254 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 NMUR1Q9HB89 426 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 GMIPQ9P107 970 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 SNX12Q9UMY4 172 aa14.58□□□□□ -0.08
NXF1-207ENST00000530875 A0A1W2PQH9 124 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 FAM92AA1XBS5 289 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 PER2O15055 1255 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 DDX3YO15523 660 aaKnown RBP14.57□□□□□ -0.08
NXF1-207ENST00000530875 SRGAP2O75044 1071 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 LRCH4O75427 683 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 CXCR5P32302 372 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 NOS2P35228 1153 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 PTPN9P43378 593 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 PITX1P78337 314 aaPredicted RBP14.57□□□□□ -0.08
NXF1-207ENST00000530875 SMAD3P84022 425 aaKnown RBP14.57□□□□□ -0.08
NXF1-207ENST00000530875 TAF10Q12962 218 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 FAM172AQ8WUF8 416 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 ADAM33Q9BZ11 813 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 ANKZF1Q9H8Y5 726 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 COMMD8Q9NX08 183 aa14.57□□□□□ -0.08
NXF1-207ENST00000530875 MIF4GDA9UHW6 222 aaKnown RBP14.56□□□□□ -0.08
NXF1-207ENST00000530875 RFXAPO00287 272 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 CLASP2O75122 1294 aaKnown RBP14.56□□□□□ -0.08
NXF1-207ENST00000530875 RNF8O76064 485 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 ZRANB2O95218 330 aaKnown RBP eCLIP14.56□□□□□ -0.087e-6■■■□□ 15
NXF1-207ENST00000530875 C8AP07357 584 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 HMGA1P17096 107 aaKnown RBP14.56□□□□□ -0.08
NXF1-207ENST00000530875 CTNNA1P35221 906 aaKnown RBP14.56□□□□□ -0.08
NXF1-207ENST00000530875 SULT1E1P49888 294 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 EPHB3P54753 998 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 VEPH1Q14D04 833 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 ACAP1Q15027 740 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 SLC25A52Q3SY17 297 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 BTBD8Q5XKL5 378 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 RBM23Q86U06 439 aaKnown RBP14.56□□□□□ -0.08
NXF1-207ENST00000530875 MON1AQ86VX9 555 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 KRT222Q8N1A0 295 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 OSBPL9Q96SU4 736 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 TBCBQ99426 244 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 TTLL2Q9BWV7 592 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 OSER1Q9NX31 292 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 FAM53CQ9NYF3 392 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 CALCOCO1Q9P1Z2 691 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 KCNK3O14649 394 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 CSH1P0DML2 217 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 CSH2P0DML3 217 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 CTNNA2P26232 953 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 MIPP30301 263 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 GJC1P36383 396 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 MLLT1Q03111 559 aaPredicted RBP14.56□□□□□ -0.08
NXF1-207ENST00000530875 TAF12Q16514 161 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 OTUD1Q5VV17 481 aaPredicted RBP14.56□□□□□ -0.08
NXF1-207ENST00000530875 CCDC149Q6ZUS6 474 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 ADGRD2Q7Z7M1 963 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 UBL4BQ8N7F7 174 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 ADAM32Q8TC27 787 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 ALG3Q92685 438 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 CAPZA3Q96KX2 299 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 NPY6RQ99463 290 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 ABCC13Q9NSE7 274 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 STAP1Q9ULZ2 295 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 PCDHA3Q9Y5H8 950 aa14.56□□□□□ -0.08
NXF1-207ENST00000530875 PLXNA3P51805 1871 aa14.55□□□□□ -0.08
NXF1-207ENST00000530875 SYNJ2BP-COX16A0A087WUM0 186 aa14.55□□□□□ -0.08
NXF1-207ENST00000530875 CCDC66A2RUB6 948 aa14.55□□□□□ -0.08
NXF1-207ENST00000530875 M0QYT0 321 aa14.55□□□□□ -0.08
NXF1-207ENST00000530875 ZNF185O15231 689 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms