RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 NSL1Q96IY1 281 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 CHST12Q9NRB3 414 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 CPSF3Q9UKF6 684 aaKnown RBP12.8□□□□□ -0.36
SCN3B-206ENST00000530277 SLIT2O94813 1529 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 CYB561D2O14569 222 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 LRCH4O75427 683 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 RECQL4O94761 1208 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 VNN1O95497 513 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 SLC25A27O95847 323 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 LGALS2P05162 132 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 ARF4P18085 180 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 PLK1P53350 603 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 FKBP1AP62942 108 aaKnown RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 PRAMEP78395 509 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 BTKQ06187 659 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 POU6F1Q14863 301 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 RBBP5Q15291 538 aaKnown RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 GRIK4Q16099 956 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 TTC39BQ5VTQ0 682 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 FKBP1CQ5VVH2 108 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 ZPBP2Q6X784 338 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 C2orf69Q8N8R5 385 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 ZNF560Q96MR9 790 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 HERPUD2Q9BSE4 406 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 ABI2Q9NYB9 513 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 BARX2Q9UMQ3 279 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 HCRTO43612 131 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 DGKDQ16760 1214 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 NOTUMQ6P988 496 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 TMEM154Q6P9G4 183 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 SLC26A11Q86WA9 606 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 SPATA6LQ8N4H0 392 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 MAN1C1Q9NR34 630 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 SHOC2Q9UQ13 582 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 ALS2Q96Q42 1657 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 PPP1R12AO14974 1030 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 HIC1Q14526 733 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 PPP1R26Q5T8A7 1209 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 KCNV1Q6PIU1 500 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 AGGF1Q8N302 714 aaeCLIP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 DNERQ8NFT8 737 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 DNAJC9Q8WXX5 260 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 PGLYRP2Q96PD5 576 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 SNRNP25Q9BV90 132 aaKnown RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 TRIM4Q9C037 500 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 TRPM3Q9HCF6 1732 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 FCHO1O14526 889 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 NVLO15381 856 aaKnown RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 CCND1P24385 295 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 MSX2P35548 267 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 DRG2P55039 364 aaKnown RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 GBE1Q04446 702 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 FBXO47Q5MNV8 452 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 FNBP1LQ5T0N5 605 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 TMEM63BQ5T3F8 832 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 MON1BQ7L1V2 547 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 LRGUKQ96M69 825 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 GPR88Q9GZN0 384 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 KRT82Q9NSB4 513 aa12.79□□□□□ -0.36
SCN3B-206ENST00000530277 MAP3K20Q9NYL2 800 aaKnown RBP12.79□□□□□ -0.36
SCN3B-206ENST00000530277 BUD23O43709 281 aaKnown RBP12.78□□□□□ -0.36
SCN3B-206ENST00000530277 GMNNO75496 209 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TAF6P49848 677 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TKTL1P51854 596 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TFAP2DQ7Z6R9 452 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 ALLCQ8N6M5 410 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TTC8Q8TAM2 541 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 PTPRN2Q92932 1015 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 FIZ1Q96SL8 496 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TSC22D3Q99576 134 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 IARS2Q9NSE4 1012 aaKnown RBP12.78□□□□□ -0.36
SCN3B-206ENST00000530277 GPRC5DQ9NZD1 345 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 DOT1LQ8TEK3 1739 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 LSM8O95777 96 aaKnown RBP12.78□□□□□ -0.36
SCN3B-206ENST00000530277 FAM200BP0CF97 657 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 EIF4BP23588 611 aaKnown RBP12.78□□□□□ -0.36
SCN3B-206ENST00000530277 CYTH1Q15438 398 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 SPRED3Q2MJR0 410 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TCHHL1Q5QJ38 904 aaPredicted RBP12.78□□□□□ -0.36
SCN3B-206ENST00000530277 N4BP2L1Q5TBK1 243 aaPredicted RBP12.78□□□□□ -0.36
SCN3B-206ENST00000530277 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 ZDHHC14Q8IZN3 488 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 C1orf127Q8N9H9 656 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TWNKQ96RR1 684 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 NXF3Q9H4D5 531 aaKnown RBP12.78□□□□□ -0.36
SCN3B-206ENST00000530277 YY1AP1Q9H869 796 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 MINDY3Q9H8M7 445 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 ANGPTL2Q9UKU9 493 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 MYPNQ86TC9 1320 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 CITO14578 2027 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TBC1D12O60347 775 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 POLBP06746 335 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 GOT1P17174 413 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 HUNKP57058 714 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 FOXR2Q6PJQ5 311 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 STRA8Q7Z7C7 330 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 LMO3Q8TAP4 145 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 EPAS1Q99814 870 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms