RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 HECAQ9UBI9 543 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 CLIP2Q9UDT6 1046 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 FEM1BQ9UK73 627 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ISY1Q9ULR0 285 aaKnown RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 PARP14Q460N5 1801 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 SMCHD1A6NHR9 2005 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 CDH23Q9H251 3354 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TCF20Q9UGU0 1960 aaKnown RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 COL11A1P12107 1806 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ZNFX1Q9P2E3 1918 aaKnown RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 IGKV6D-41A0A0C4DH26 115 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 GPAA1O43292 621 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ZNF623O75123 536 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 CAND2O75155 1236 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 RFPL1O75677 317 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TIMP1P01033 207 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 SLC3A2P08195 630 aaKnown RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TSPY3P0CV98 308 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TSPY8P0CW00 308 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 RAP2AP10114 183 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ACVR2BQ13705 512 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 FAM102BQ5T8I3 360 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 AFMIDQ63HM1 303 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 USP45Q70EL2 814 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ARMCX2Q7L311 632 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 EPM2AIP1Q7L775 607 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 RSPH3Q86UC2 560 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 SGMS1Q86VZ5 419 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 EXOC8Q8IYI6 725 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ZNF808Q8N4W9 903 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TMEM199Q8N511 208 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 USP38Q8NB14 1042 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 GMCL1P1Q8NEA9 526 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 DNERQ8NFT8 737 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 PGBD4Q96DM1 585 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 CPPED1Q9BRF8 314 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 LSM14BQ9BX40 385 aaKnown RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 NACAP1Q9BZK3 213 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ABHD16BQ9H3Z7 469 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 RAVER2Q9HCJ3 691 aaKnown RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 MTMR4Q9NYA4 1195 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TBX21Q9UL17 535 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 PNMA8BQ9ULN7 279 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 RIPK3Q9Y572 518 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 SLC30A1Q9Y6M5 507 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 CACNA1GO43497 2377 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 MYH7P12883 1935 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 PLXNA1Q9UIW2 1896 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 MYADML2A6NDP7 307 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 K7ESM1 405 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 GPR32O75388 356 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 PRDM1O75626 825 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 CABYRO75952 493 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 ASGR1P07306 291 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 HK1P19367 917 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 DDCP20711 480 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 ACO1P21399 889 aaKnown RBP5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 LPOP22079 712 aaPredicted RBP5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 GNALP38405 381 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 SLC1A4P43007 532 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 ALDH1A3P47895 512 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 STAT2P52630 851 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 DSC2Q02487 901 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 IKQ13123 557 aaPredicted RBP5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 HLTFQ14527 1009 aaKnown RBP eCLIP5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 MLC1Q15049 377 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 PSRC1Q6PGN9 363 aaPredicted RBP5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 CCDC129Q6ZRS4 1044 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 Q6ZSN1 163 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 ZNF572Q7Z3I7 529 aaPredicted RBP5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 POLNQ7Z5Q5 900 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 FAM160B2Q86V87 743 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 MYO1HQ8N1T3 1032 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 CXorf38Q8TB03 319 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 CHURC1Q8WUH1 139 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 PPM1EQ8WY54 764 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 TIFAQ96CG3 184 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 CLIP3Q96DZ5 547 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 CLPTM1LQ96KA5 538 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 CPEB1Q9BZB8 566 aaKnown RBP5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 NAPBQ9H115 298 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 UPF3AQ9H1J1 476 aaKnown RBP5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 MTIF3Q9H2K0 278 aaKnown RBP5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 ACAD9Q9H845 621 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 MANSC1Q9H8J5 431 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 CD248Q9HCU0 757 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 PLIN4Q96Q06 1357 aa5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 GREB1LQ9C091 1923 aaPredicted RBP5.88□□□□□ -1.47
AMBRA1-209ENST00000529963 CACNA1BQ00975 2339 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 ASB14A6NK59 587 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 CAPN14A8MX76 684 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 TMEM232C9JQI7 657 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 ERC2O15083 957 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 ALOX15P16050 662 aaPredicted RBP5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 COMTP21964 271 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 AKAP5P24588 427 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 CDK7P50613 346 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 RAP2BP61225 183 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 TFAP4Q01664 338 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms