RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-213	ENST00000528999	NGRN	Q9NPE2	291 aa	Known RBP	11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	SAE1	Q9UBE0	346 aa	Predicted RBP	11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	PRKAG3	Q9UGI9	489 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	ZNF180	Q9UJW8	692 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	STARD13	Q9Y3M8	1113 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	TEX264	Q9Y6I9	313 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	CAPN7	Q9Y6W3	813 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999		H0YHG0	523 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	TREH	O43280	583 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	TYROBP	O43914	113 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	GABBR2	O75899	941 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	ATP5H	O75947	161 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	ZBED1	O96006	694 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	MYL3	P08590	195 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	MLN	P12872	115 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	AKR1A1	P14550	325 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	CREB1	P16220	341 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	TAC1	P20366	129 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	NOS2	P35228	1153 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	IFNAR2	P48551	515 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	BASP1	P80723	227 aa	Known RBP	11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	ATP11A	P98196	1134 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	MMRN1	Q13201	1228 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	PDK4	Q16654	411 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	FSCN1	Q16658	493 aa	Known RBP	11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	SLC45A4	Q5BKX6	768 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	SPDYA	Q5MJ70	313 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	PRAMEF19	Q5SWL8	479 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	SH3PXD2A	Q5TCZ1	1133 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	ANKRD22	Q5VYY1	191 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	NUGGC	Q68CJ6	796 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	BNIPL	Q7Z465	357 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	SPATA21	Q7Z572	469 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	CCNJL	Q8IV13	435 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	ANKRD42	Q8N9B4	389 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	SMG8	Q8ND04	991 aa	Known RBP	11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	FBXO36	Q8NEA4	188 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	TGS1	Q96RS0	853 aa	Known RBP	11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	MTG1	Q9BT17	334 aa	Predicted RBP	11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	PITPNM3	Q9BZ71	974 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	VPS11	Q9H270	941 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	XAB2	Q9HCS7	855 aa	Known RBP	11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	CTNNAL1	Q9UBT7	734 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	TBK1	Q9UHD2	729 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	CPA4	Q9UI42	421 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	GJD2	Q9UKL4	321 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	GINS2	Q9Y248	185 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	IPP	Q9Y573	584 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	NME7	Q9Y5B8	376 aa		11.12	□□□□□ -0.63
PUF60-213	ENST00000528999	MGAM	O43451	1857 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	ANKRD65	E5RJM6	399 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	PPEF2	O14830	753 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	PPP1R12A	O14974	1030 aa	Predicted RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	KCNN4	O15554	427 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	DAB1	O75553	588 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	DGKI	O75912	1065 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	STK10	O94804	968 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	FGFR1	P11362	822 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	PTPN1	P18031	435 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	AKAP5	P24588	427 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	CYP2F1	P24903	491 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	FDFT1	P37268	417 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	ARL4A	P40617	200 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	SCTR	P47872	440 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	HCAR3	P49019	387 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	WDR4	P57081	412 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	GJA9	P57773	515 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	YWHAZ	P63104	245 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	MRPS6	P82932	125 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	ZNF200	P98182	395 aa	Predicted RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	PURA	Q00577	322 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	TMEM62	Q0P6H9	643 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	FASTKD3	Q14CZ7	662 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	TAF1C	Q15572	869 aa	Predicted RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	PKN2	Q16513	984 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	BBS9	Q3SYG4	887 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	HHAT	Q5VTY9	493 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	C1orf228	Q6PIY5	440 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	PDZD4	Q76G19	769 aa	Predicted RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	MRPL10	Q7Z7H8	261 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	ZC3H18	Q86VM9	953 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	ADGRF2	Q8IZF7	708 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	B3GALNT2	Q8NCR0	500 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	ZNF398	Q8TD17	642 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	FBF1	Q8TES7	1133 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	DCAKD	Q8WVC6	231 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	SLC44A1	Q8WWI5	657 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	MTBP	Q96DY7	904 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	PPP1R10	Q96QC0	940 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	SLC2A13	Q96QE2	648 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	BRD8	Q9H0E9	1235 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	ZFYVE28	Q9HCC9	887 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	RAB6B	Q9NRW1	208 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	FAM49B	Q9NUQ9	324 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	ETNK2	Q9NVF9	386 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	FLRT1	Q9NZU1	646 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	KLHL14	Q9P2G3	628 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	STAP1	Q9ULZ2	295 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	GIT1	Q9Y2X7	761 aa		11.11	□□□□□ -0.63
PUF60-213	ENST00000528999	TRPV2	Q9Y5S1	764 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms