RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 TMEFF1Q8IYR6 380 aa18.19■□□□□ 0.5
ATM-213ENST00000527891 FRMD1Q8N878 549 aa18.19■□□□□ 0.5
ATM-213ENST00000527891 MBD1Q9UIS9 605 aaPredicted RBP18.19■□□□□ 0.5
ATM-213ENST00000527891 CNOT1A5YKK6 2376 aaKnown RBP18.19■□□□□ 0.5
ATM-213ENST00000527891 ABCA7Q8IZY2 2146 aa18.19■□□□□ 0.5
ATM-213ENST00000527891 NUP205Q92621 2012 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 GIPC1O14908 333 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 CALUO43852 315 aaPredicted RBP18.18■□□□□ 0.5
ATM-213ENST00000527891 TBX18O95935 607 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 HLA-DRAP01903 254 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 ADORA2BP29275 332 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 PTGER3P43115 390 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 GOLGA8FQ08AF8 430 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 GOLGA8DPQ0D2H9 430 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 ZNF252P-AS1Q0IIN9 211 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 LMAN2Q12907 356 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 TRIM61Q5EBN2 209 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 SH3PXD2AQ5TCZ1 1133 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 SYT12Q8IV01 421 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 KLF16Q9BXK1 252 aaPredicted RBP18.18■□□□□ 0.5
ATM-213ENST00000527891 NUSAP1Q9BXS6 441 aaKnown RBP18.18■□□□□ 0.5
ATM-213ENST00000527891 IMPG2Q9BZV3 1241 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 CYLDQ9NQC7 956 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 USP25Q9UHP3 1055 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 LSM7Q9UK45 103 aaKnown RBP18.18■□□□□ 0.5
ATM-213ENST00000527891 SCML2Q9UQR0 700 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 STARD13Q9Y3M8 1113 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 THADAQ6YHU6 1953 aa18.18■□□□□ 0.5
ATM-213ENST00000527891 A0A1B0GVL5 298 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 TRIM24O15164 1050 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 GREM1O60565 184 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 KIF20AO95235 890 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 HOXB2P14652 356 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 PFKFB1P16118 471 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 ATP5C1P36542 298 aaKnown RBP18.17■□□□□ 0.5
ATM-213ENST00000527891 DPP6P42658 865 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 INCA1Q0VD86 236 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 C1orf220Q5T0J3 134 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 LYSMD4Q5XG99 296 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 GRAMD4Q6IC98 578 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 CLEC20AQ6ZU45 233 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 GPRIN1Q7Z2K8 1008 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 XPO6Q96QU8 1125 aaKnown RBP18.17■□□□□ 0.5
ATM-213ENST00000527891 HNRNPABQ99729 332 aaKnown RBP18.17■□□□□ 0.5
ATM-213ENST00000527891 TMEM74BQ9NUR3 256 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 DNAJC17Q9NVM6 304 aaKnown RBP18.17■□□□□ 0.5
ATM-213ENST00000527891 TRAF3IP3Q9Y228 551 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 CHD8Q9HCK8 2581 aa18.17■□□□□ 0.5
ATM-213ENST00000527891 MAP1BP46821 2468 aaKnown RBP18.16■□□□□ 0.5
ATM-213ENST00000527891 MYOFQ9NZM1 2061 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 HHLA1C9JL84 531 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 NEDD8-MDP1E9PL57 170 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 MAPK13O15264 365 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 CYP26A1O43174 497 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 CACNG3O60359 315 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 CEACAM1P13688 526 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 TYRP14679 529 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 CSRP1P21291 193 aaKnown RBP18.16■□□□□ 0.5
ATM-213ENST00000527891 ACO1P21399 889 aaKnown RBP18.16■□□□□ 0.5
ATM-213ENST00000527891 CMA1P23946 247 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 NTSR1P30989 418 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 VAMP7P51809 220 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 JAKMIP2Q96AA8 810 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 CYFIP2Q96F07 1278 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 TWNKQ96RR1 684 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 BBS2Q9BXC9 721 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 NT5C1AQ9BXI3 368 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 PNPLA8Q9NP80 782 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.16■□□□□ 0.5
ATM-213ENST00000527891 OSER1Q9NX31 292 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 MARK1Q9P0L2 795 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 WDR35Q9P2L0 1181 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 HCN2Q9UL51 889 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 PCDHA5Q9Y5H7 936 aa18.16■□□□□ 0.5
ATM-213ENST00000527891 AP5Z1O43299 807 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 GABRG2P18507 467 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 NR2F2P24468 414 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 WASP42768 502 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 NFIL3Q16649 462 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 UAP1L1Q3KQV9 507 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 PEAR1Q5VY43 1037 aaPredicted RBP18.15■□□□□ 0.5
ATM-213ENST00000527891 EGFLAMQ63HQ2 1017 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 KLHDC10Q6PID8 442 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 SLC23A3Q6PIS1 610 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 SLC36A4Q6YBV0 504 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 TPGS1Q6ZTW0 290 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 INTS8Q75QN2 995 aaKnown RBP18.15■□□□□ 0.5
ATM-213ENST00000527891 MIB1Q86YT6 1006 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 CHPFQ8IZ52 775 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 CCDC47Q96A33 483 aaKnown RBP18.15■□□□□ 0.5
ATM-213ENST00000527891 CYP3A43Q9HB55 503 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 NMUR1Q9HB89 426 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 APOBEC3GQ9HC16 384 aaKnown RBP18.15■□□□□ 0.5
ATM-213ENST00000527891 CALCOCO1Q9P1Z2 691 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 PILRBQ9UKJ0 227 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 HPSEQ9Y251 543 aa18.15■□□□□ 0.5
ATM-213ENST00000527891 ATXN2Q99700 1313 aaKnown RBP18.15■□□□□ 0.5
ATM-213ENST00000527891 A0A1W2PQF6 199 aa18.14■□□□□ 0.49
ATM-213ENST00000527891 A0A1W2PQH9 124 aa18.14■□□□□ 0.49
ATM-213ENST00000527891 ZBTB24O43167 697 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms