RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 CYLDQ9NQC7 956 aa18.48■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 WDR35Q9P2L0 1181 aa18.48■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 SCML2Q9UQR0 700 aa18.48■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 TRAF3IP3Q9Y228 551 aa18.48■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 STARD13Q9Y3M8 1113 aa18.48■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 ADAM23O75077 832 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 HLA-DRAP01903 254 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 IRF1P10914 325 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 HNRNPLP14866 589 aaKnown RBP eCLIP18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 PFKFB1P16118 471 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 CSRP1P21291 193 aaKnown RBP18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 ATP5C1P36542 298 aaKnown RBP18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 PSEN1P49768 467 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 DLG4P78352 724 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 MESP2Q0VG99 397 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 C10orf76Q5T2E6 689 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 GRAMD4Q6IC98 578 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 SLC36A4Q6YBV0 504 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 RABEPKQ7Z6M1 372 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 SYT12Q8IV01 421 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 PGBD3Q8N328 593 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 HMGB4Q8WW32 186 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 PIGKQ92643 395 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 HNRNPABQ99729 332 aaKnown RBP18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 NT5C1AQ9BXI3 368 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 MARK1Q9P0L2 795 aa18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 CIZ1Q9ULV3 898 aaPredicted RBP18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 MAP1BP46821 2468 aaKnown RBP18.47■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 CHD8Q9HCK8 2581 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 AP5Z1O43299 807 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 CACNG3O60359 315 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 KRT13P13646 458 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 CEACAM1P13688 526 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 NTSR1P30989 418 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 VAMP7P51809 220 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 MAP7D1Q3KQU3 841 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 EMC10Q5UCC4 262 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 LYSMD4Q5XG99 296 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 SDE2Q6IQ49 451 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 CLEC20AQ6ZU45 233 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 SFTPA1Q8IWL2 248 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 TTC39CQ8N584 583 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 NAT16Q8N8M0 369 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 CDK5RAP1Q96SZ6 601 aaKnown RBP18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 FAM49BQ9NUQ9 324 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 HMGXB4Q9UGU5 601 aa18.46■□□□□ 0.55
CKLF-CMTM1-202ENST00000527845 ZNF217O75362 1048 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 KRT37O76014 449 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 BEST1O76090 585 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 HOXB2P14652 356 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 RPL13P26373 211 aaKnown RBP18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 ADORA2BP29275 332 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 TRIM61Q5EBN2 209 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 PEAR1Q5VY43 1037 aaPredicted RBP18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 TMEM25Q86YD3 366 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 ZNF276Q8N554 614 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 CEP76Q8TAP6 659 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 CYFIP2Q96F07 1278 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 FAXDC2Q96IV6 333 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 KLF16Q9BXK1 252 aaPredicted RBP18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 NIF3L1Q9GZT8 377 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 DNAJC17Q9NVM6 304 aaKnown RBP18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 HPSEQ9Y251 543 aa18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 MYO18AQ92614 2054 aaKnown RBP18.45■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 A0A1B0GVL5 298 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 ANTXRLA6NF34 631 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 PATE3B3GLJ2 98 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 RHOBTB3O94955 611 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 NR2F2P24468 414 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 SYKP43405 635 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 PLA2G4AP47712 749 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 KRT85P78386 507 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 IRX4P78413 519 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 ZNF252P-AS1Q0IIN9 211 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 ORC1Q13415 861 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 E2F5Q15329 346 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 SH3PXD2AQ5TCZ1 1133 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 SPOPLQ6IQ16 392 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 SLC23A3Q6PIS1 610 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 TMEFF1Q8IYR6 380 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 C12orf29Q8N999 325 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 RLN3Q8WXF3 142 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 SPATA32Q96LK8 384 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 BBS2Q9BXC9 721 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 FAM124BQ9H5Z6 455 aaPredicted RBP18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 DNMT3LQ9UJW3 386 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 ZNF510Q9Y2H8 683 aa18.44■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 CEP192Q8TEP8 1941 aa18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 NEDD8-MDP1E9PL57 170 aa18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 CDX4O14627 284 aaPredicted RBP18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 RALAP11233 206 aa18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 TYRP14679 529 aa18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 ACO1P21399 889 aaKnown RBP18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 PSMC2P35998 433 aaKnown RBP18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 C1orf220Q5T0J3 134 aa18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 CCDC186Q7Z3E2 898 aa18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 FAM186BQ8IYM0 893 aa18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 ELMO3Q96BJ8 720 aa18.43■□□□□ 0.54
CKLF-CMTM1-202ENST00000527845 CCDC34Q96HJ3 373 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms