RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 UBOX5O94941 541 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 ZBED1O96006 694 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 KRT4P19013 534 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 ELK3P41970 407 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 ADAM17P78536 824 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 HHATQ5VTY9 493 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 LIMS2Q7Z4I7 341 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 CDKL3Q8IVW4 592 aaPredicted RBP15.97■□□□□ 0.15
USH1C-207ENST00000527720 LRRC8CQ8TDW0 803 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 KBTBD7Q8WVZ9 684 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 CHMP2BQ9UQN3 213 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 HES2Q9Y543 173 aa15.97■□□□□ 0.15
USH1C-207ENST00000527720 IQANK1A0A1B0GTG1 560 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 SMIM28A0A1B0GU29 152 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 KPNA7A9QM74 516 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 GNL1P36915 607 aaPredicted RBP15.96■□□□□ 0.15
USH1C-207ENST00000527720 NR2C2P49116 596 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 SF3A3Q12874 501 aaKnown RBP eCLIP15.96■□□□□ 0.15
USH1C-207ENST00000527720 BNIP1Q12981 228 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 MFSD10Q14728 455 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 GLRA4Q5JXX5 417 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 SPRYD7Q5W111 196 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 DPEP3Q9H4B8 488 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 NRDE2Q9H7Z3 1164 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 PRDM16Q9HAZ2 1276 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 RAB6BQ9NRW1 208 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 PHTF1Q9UMS5 762 aa15.96■□□□□ 0.15
USH1C-207ENST00000527720 L1CAMP32004 1257 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 TAF6P49848 677 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 EFTUD2Q15029 972 aaKnown RBP eCLIP15.96■□□□□ 0.14
USH1C-207ENST00000527720 SNX17Q15036 470 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 SV2CQ496J9 727 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 FAM133BQ5BKY9 247 aaKnown RBP15.96■□□□□ 0.14
USH1C-207ENST00000527720 TAB3Q8N5C8 712 aaPredicted RBP15.96■□□□□ 0.14
USH1C-207ENST00000527720 CCDC63Q8NA47 563 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 MCUQ8NE86 351 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 LRRC39Q96DD0 335 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 B3GNT5Q9BYG0 378 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 SNX25Q9H3E2 840 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 GPATCH2LQ9NWQ4 482 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 HEY1Q9Y5J3 304 aa15.96■□□□□ 0.14
USH1C-207ENST00000527720 HAS3O00219 553 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 EDF1O60869 148 aaKnown RBP15.95■□□□□ 0.14
USH1C-207ENST00000527720 GSTA2P09210 222 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 CYP2F1P24903 491 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 RBL1P28749 1068 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 SLC1A5Q15758 541 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 CA9Q16790 459 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 STRADAQ7RTN6 431 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 PARP9Q8IXQ6 854 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 C7orf31Q8N865 590 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 APPL2Q8NEU8 664 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 SLC44A1Q8WWI5 657 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 MRRFQ96E11 262 aaKnown RBP15.95■□□□□ 0.14
USH1C-207ENST00000527720 TNIP3Q96KP6 325 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 ETNK2Q9NVF9 386 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 PIN4Q9Y237 131 aaKnown RBP15.95■□□□□ 0.14
USH1C-207ENST00000527720 IKBKGQ9Y6K9 419 aa15.95■□□□□ 0.14
USH1C-207ENST00000527720 TCRBV9S1A1TA0A576 114 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 KBTBD13C9JR72 458 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 MGRN1O60291 552 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 FAM163BP0C2L3 166 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 SKIV2L2P42285 1042 aaKnown RBP15.94■□□□□ 0.14
USH1C-207ENST00000527720 NRLP54845 237 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 ZNF200P98182 395 aaPredicted RBP15.94■□□□□ 0.14
USH1C-207ENST00000527720 EFHC1Q5JVL4 640 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 MORN1Q5T089 497 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 ICE2Q659A1 982 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 LVRNQ6Q4G3 990 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 TLK2Q86UE8 772 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 BANPQ8N9N5 519 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 DNAJB3Q8WWF6 145 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 PTPN18Q99952 460 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 GRID1Q9ULK0 1009 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 TRDMT1O14717 391 aaKnown RBP15.94■□□□□ 0.14
USH1C-207ENST00000527720 GCATO75600 419 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 CCDC130P13994 396 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 AKAP5P24588 427 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 PSEN2P49810 448 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 CPT1AP50416 773 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 MAP2K5Q13163 448 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 DNAJC3Q13217 504 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 SEPT7Q16181 437 aaKnown RBP15.94■□□□□ 0.14
USH1C-207ENST00000527720 SLC45A4Q5BKX6 768 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 PPP6R3Q5H9R7 873 aaPredicted RBP15.94■□□□□ 0.14
USH1C-207ENST00000527720 FAM47EQ6ZV65 393 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 PSTKQ8IV42 348 aaKnown RBP15.94■□□□□ 0.14
USH1C-207ENST00000527720 IGDCC3Q8IVU1 814 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 NME8Q8N427 588 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 FITM2Q8N6M3 262 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 RCOR3Q9P2K3 495 aaPredicted RBP15.94■□□□□ 0.14
USH1C-207ENST00000527720 GJD2Q9UKL4 321 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 AP4E1Q9UPM8 1137 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 USH1CQ9Y6N9 552 aa15.94■□□□□ 0.14
USH1C-207ENST00000527720 XPO1O14980 1071 aaKnown RBP15.93■□□□□ 0.14
USH1C-207ENST00000527720 FAM155BO75949 473 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 INHBAP08476 426 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 FGFR1P11362 822 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 ALADP13716 330 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 ADORA2BP29275 332 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms