RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 BEND5Q7L4P6 421 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 CYFIP1Q7L576 1253 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 IRF2BP1Q8IU81 584 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 KIAA2013Q8IYS2 634 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 ELMOD2Q8IZ81 293 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 CHCHD4Q8N4Q1 142 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 FLAD1Q8NFF5 587 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 GRPEL2Q8TAA5 225 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 HELQQ8TDG4 1101 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 CAPSLQ8WWF8 208 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 ZNF75CPQ92670 426 aaPredicted RBP6.03□□□□□ -1.44
CD44-225ENST00000527326 COL26A1Q96A83 441 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 UROC1Q96N76 676 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 HERC2P3Q9BVR0 1158 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 CALN1Q9BXU9 219 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 OR2B2Q9GZK3 357 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 DNAI2Q9GZS0 605 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 HOXD1Q9GZZ0 328 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 CLPBQ9H078 707 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 FOXP1Q9H334 677 aaPredicted RBP6.03□□□□□ -1.44
CD44-225ENST00000527326 SMARCAD1Q9H4L7 1026 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 RMND5AQ9H871 391 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 C14orf93Q9H972 538 aaKnown RBP6.03□□□□□ -1.44
CD44-225ENST00000527326 NEK6Q9HC98 313 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 KIAA1586Q9HCI6 787 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 FARSBQ9NSD9 589 aaKnown RBP6.03□□□□□ -1.44
CD44-225ENST00000527326 TMOD2Q9NZR1 351 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 SENP1Q9P0U3 644 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 VPS54Q9P1Q0 977 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 ANKFY1Q9P2R3 1169 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 ARMCX3Q9UH62 379 aaPredicted RBP6.03□□□□□ -1.44
CD44-225ENST00000527326 AMACRQ9UHK6 382 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 NEU2Q9Y3R4 380 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 AP4S1Q9Y587 144 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 PCDHGA3Q9Y5H0 932 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 CPDO75976 1380 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 MYH6P13533 1939 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 COL15A1P39059 1388 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 ZMYM2Q9UBW7 1377 aa6.03□□□□□ -1.44
CD44-225ENST00000527326 ANKRD62A6NC57 917 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 H7C0C1 242 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 RNF103O00237 685 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 KIAA0391O15091 583 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 BET1O15155 118 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 FOXP2O15409 715 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 YKT6O15498 198 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 PRPF4O43172 522 aaKnown RBP eCLIP6.02□□□□□ -1.45
CD44-225ENST00000527326 LILRB5O75023 590 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 RNASEH2AO75792 299 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 PLEKHA8P1O95397 391 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 PRLP01236 227 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 PLEKP08567 350 aaPredicted RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 SRGAP2BP0DMP2 458 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 THRAP10827 490 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 KRT3P12035 628 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 ATP6V1B1P15313 513 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 NPR3P17342 541 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 BTF3P20290 206 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 IGFBP4P22692 258 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 HOXA7P31268 230 aaPredicted RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 SLCO1A2P46721 670 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 NPEPPSP55786 919 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 PHC1P78364 1004 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 S100A12P80511 92 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 GBE1Q04446 702 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 OCA2Q04671 838 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 RAD51Q06609 339 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 CETN1Q12798 172 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 RALGDSQ12967 914 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 EFTUD2Q15029 972 aaKnown RBP eCLIP6.02□□□□□ -1.45
CD44-225ENST00000527326 STK11Q15831 433 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 RTN1Q16799 776 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 SMU1Q2TAY7 513 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 ZNF772Q68DY9 489 aaPredicted RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 NANOGP8Q6NSW7 305 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 METTL2BQ6P1Q9 378 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 FBXL19Q6PCT2 694 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 TMC5Q6UXY8 1006 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 C20orf204Q6ZNR8 217 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 EPM2AIP1Q7L775 607 aaPredicted RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 EEPD1Q7L9B9 569 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 TAS2R42Q7RTR8 314 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 MTDHQ86UE4 582 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 GPR180Q86V85 440 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 TICAM1Q8IUC6 712 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 BRSK2Q8IWQ3 736 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 SMYD4Q8IYR2 804 aaPredicted RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 Q8N3U1 123 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 GALNT11Q8NCW6 608 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 SIMC1Q8NDZ2 872 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 TSPAN14Q8NG11 270 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 OR10Z1Q8NGY1 313 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 TBC1D15Q8TC07 691 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 HM13Q8TCT9 377 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 FRS2Q8WU20 508 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 ANKS1AQ92625 1134 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 MTBPQ96DY7 904 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 ACAP3Q96P50 834 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 PNMA5Q96PV4 448 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 MTMR9Q96QG7 549 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms