RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ADHFE1Q8IWW8 467 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 ZDHHC14Q8IZN3 488 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 ZSCAN18Q8TBC5 510 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 EDEM1Q92611 657 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 NT5C3BQ969T7 300 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 C18orf8Q96DM3 657 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 PDLIM2Q96JY6 352 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 RPGRIP1Q96KN7 1286 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 SLITRK1Q96PX8 696 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 SLC2A13Q96QE2 648 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 PANX2Q96RD6 677 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 C11orf70Q9BRQ4 267 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 KLF16Q9BXK1 252 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 NHEJ1Q9H9Q4 299 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 TLR8Q9NR97 1041 aaKnown RBP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 GKN1Q9NS71 199 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 CLIC5Q9NZA1 410 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 GDE1Q9NZC3 331 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 IMPACTQ9P2X3 320 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 NAGPAQ9UK23 515 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 NAALADL1Q9UQQ1 740 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 TMCO5BA8MYB1 307 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 RTN2O75298 545 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 FBXO21O94952 628 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 LCA5LO95447 670 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 RARGP13631 454 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 HDCP19113 662 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 TFE3P19532 575 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 RRM1P23921 792 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 TUBP50607 506 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 YWHAZP63104 245 aaKnown RBP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 C1QBPQ07021 282 aaKnown RBP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 HTR4Q13639 388 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 MTF1Q14872 753 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 TAF12Q16514 161 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 SLC18A3Q16572 532 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 AAK1Q2M2I8 961 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 RAB6CQ53S08 254 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 HECTD3Q5T447 861 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 ARTNQ5T4W7 220 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 OR6B2Q6IFH4 312 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 MSANTD2Q6P1R3 559 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 ALKBH5Q6P6C2 394 aaKnown RBP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 KLHDC10Q6PID8 442 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 BEND5Q7L4P6 421 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 SLC26A9Q7LBE3 791 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 OTOP3Q7RTS5 596 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 SIX6OS1Q8N1H7 587 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 PDZD8Q8NEN9 1154 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 JOSD2Q8TAC2 188 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 MRPS31Q92665 395 aaKnown RBP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 SMARCD2Q92925 531 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 P2RY11Q96G91 374 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 NECAB3Q96P71 396 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 RAB6CQ9H0N0 254 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 PDCL3Q9H2J4 239 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 ASNSD1Q9NWL6 643 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 EHD2Q9NZN4 543 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 PRKAG3Q9UGI9 489 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
NEDD8-205ENST00000527046 REXO2Q9Y3B8 237 aaKnown RBP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 SPTBN5Q9NRC6 3674 aaKnown RBP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 KIF26AQ9ULI4 1882 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 HELZP42694 1942 aaKnown RBP11.29□□□□□ -0.6
NEDD8-205ENST00000527046 TLR5O60602 858 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 GRAP2O75791 330 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 ABL1P00519 1130 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 IGLV3-25P01717 112 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 LTFP02788 710 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 KLKB1P03952 638 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 PFKLP17858 780 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
NEDD8-205ENST00000527046 FLT3P36888 993 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 SCNN1AP37088 669 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 PSEN1P49768 467 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 OGDHQ02218 1023 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 PLEKHA7Q6IQ23 1121 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 VITQ6UXI7 678 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 ARCQ7LC44 396 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 DEFB106AQ8N104 65 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 VCPIP1Q96JH7 1222 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 PACSIN1Q9BY11 444 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 KCNK12Q9HB15 430 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 ABCC13Q9NSE7 274 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 SPTLC3Q9NUV7 552 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 ADAM22Q9P0K1 906 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 SFMBT1Q9UHJ3 866 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 ARHGAP26Q9UNA1 814 aa11.28□□□□□ -0.6
NEDD8-205ENST00000527046 ZFP37Q9Y6Q3 630 aaPredicted RBP11.28□□□□□ -0.6
NEDD8-205ENST00000527046 SOWAHDA6NJG2 315 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 SIGLEC16A6NMB1 481 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 I6L893 689 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 ARNTLO00327 626 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 IGLV3-27P01718 113 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 ASGR2P07307 311 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 GLI1P08151 1106 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms