RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 CGGBP1Q9UFW8 167 aaPredicted RBP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 SEC63Q9UGP8 760 aaKnown RBP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 INVSQ9Y283 1065 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 BACE2Q9Y5Z0 518 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 CFAP46Q8IYW2 2715 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 SH3D21A4FU49 640 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 ARL5CA6NH57 179 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 CDX4O14627 284 aaPredicted RBP5.96□□□□□ -1.46
SF3B2-205ENST00000526653 SCAMP3O14828 347 aaKnown RBP5.96□□□□□ -1.46
SF3B2-205ENST00000526653 ZNF263O14978 683 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 ADAM12O43184 909 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 SFPQP23246 707 aaKnown RBP eCLIP5.96□□□□□ -1.46
SF3B2-205ENST00000526653 KPNA1P52294 538 aaPredicted RBP5.96□□□□□ -1.46
SF3B2-205ENST00000526653 IRX4P78413 519 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 AMPD2Q01433 879 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 IMMTQ16891 758 aaKnown RBP5.96□□□□□ -1.46
SF3B2-205ENST00000526653 SLC5A9Q2M3M2 681 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 PLK5Q496M5 336 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 RNF168Q8IYW5 571 aaPredicted RBP5.96□□□□□ -1.46
SF3B2-205ENST00000526653 ARHGEF39Q8N4T4 335 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 LINC01465Q8N7H1 131 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 NETO2Q8NC67 525 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 OR6P1Q8NGX9 317 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 SLC7A14Q8TBB6 771 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 RSPH1Q8WYR4 309 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 DNASE1L2Q92874 299 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 SPATA32Q96LK8 384 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 ZSWIM3Q96MP5 696 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 GAD1Q99259 594 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 MTA3Q9BTC8 594 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 INO80BQ9C086 356 aaPredicted RBP5.96□□□□□ -1.46
SF3B2-205ENST00000526653 LY9Q9HBG7 655 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 TMEM9BQ9NQ34 198 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 POLR3BQ9NW08 1133 aaPredicted RBP5.96□□□□□ -1.46
SF3B2-205ENST00000526653 GDE1Q9NZC3 331 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 CACNG4Q9UBN1 327 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 PCDHGA5Q9Y5G8 931 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 DOCK5Q9H7D0 1870 aa5.96□□□□□ -1.46
SF3B2-205ENST00000526653 LNP1A1A4G5 178 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 ERICH2A1L162 156 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 SLC38A8A6NNN8 435 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 PATE3B3GLJ2 98 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 IPO5O00410 1097 aaKnown RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 MEFVO15553 781 aaPredicted RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 RHOP08100 348 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 SRGAP2CP0DJJ0 459 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 CEBPBP17676 345 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 PTPN2P17706 415 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 PSMC3P17980 439 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 FCARP24071 287 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 HOXA6P31267 233 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 OR1D2P34982 312 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 RDXP35241 583 aaKnown RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 NT5C2P49902 561 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 DNM2P50570 870 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 RAB27AP51159 221 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 SCNN1GP51170 649 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 MFAP1P55081 439 aaKnown RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 CDC42EP1Q00587 391 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 EFEMP1Q12805 493 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 LRRC32Q14392 662 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 UBXN11Q5T124 520 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 ZFYVE27Q5T4F4 411 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 FAM171A1Q5VUB5 890 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 FUT10Q6P4F1 479 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 CWC27Q6UX04 472 aaKnown RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 VITQ6UXI7 678 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 CATIPQ7Z7H3 387 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 GGNQ86UU5 652 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 PLA2G4DQ86XP0 818 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 RHPN2Q8IUC4 686 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 SRBD1Q8N5C6 995 aaKnown RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 LNX1Q8TBB1 728 aaPredicted RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 CSGALNACT1Q8TDX6 532 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 HASPINQ8TF76 798 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 TCEAL4Q96EI5 215 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 PEX11GQ96HA9 241 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 RCC1LQ96I51 464 aaKnown RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 ZC3H10Q96K80 434 aaKnown RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 MBOAT7Q96N66 472 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 HNRNPABQ99729 332 aaKnown RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 ZNF577Q9BSK1 485 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 APOL6Q9BWW8 343 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 SLC32A1Q9H598 525 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 SUCLA2Q9P2R7 463 aaPredicted RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 TCEAL9Q9UHQ7 104 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 BAZ2BQ9UIF8 2168 aaKnown RBP5.95□□□□□ -1.46
SF3B2-205ENST00000526653 FBXW11Q9UKB1 542 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 NUDT5Q9UKK9 219 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 HES2Q9Y543 173 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 PCDHA10Q9Y5I2 948 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 ZNF462Q96JM2 2506 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 DOCK8Q8NF50 2099 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 ZMYM6O95789 1325 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 C2orf16Q68DN1 1984 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 LAMA4Q16363 1823 aa5.95□□□□□ -1.46
SF3B2-205ENST00000526653 LOXHD1Q8IVV2 1947 aa5.94□□□□□ -1.46
SF3B2-205ENST00000526653 NPHP3-ACAD11A0A0J9YXS1 232 aa5.94□□□□□ -1.46
SF3B2-205ENST00000526653 BCLAF3A2AJT9 711 aaKnown RBP5.94□□□□□ -1.46
SF3B2-205ENST00000526653 TMEM150BA6NC51 233 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms