RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CAPRIN2Q6IMN6 1127 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 ZDHHC24Q6UX98 284 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 NGDNQ8NEJ9 315 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 OR6B3Q8NGW1 331 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 TRMT61AQ96FX7 289 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 MEIS3Q99687 375 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 DECR2Q9NUI1 292 aa3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-219ENST00000526299 A0A088AWK7 358 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 TMEM272A0A1B0GTI8 110 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 C2CD4BA6NLJ0 364 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 SRGAP2O75044 1071 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 KITP10721 976 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 GATMP50440 423 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 DEUP1Q05D60 604 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 SLC13A2Q13183 592 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 KPNB1Q14974 876 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 FBXL22Q6P050 247 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 KCTD20Q7Z5Y7 419 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 TMEM199Q8N511 208 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 FAM71DQ8N9W8 422 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 WFIKKN2Q8TEU8 576 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 HPS3Q969F9 1004 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 C1GALT1C1Q96EU7 318 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 EDC3Q96F86 508 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 WBP1Q96G27 269 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 NTPCRQ9BSD7 190 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 TM2D2Q9BX73 214 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 TRIM54Q9BYV2 358 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 TRIM5Q9C035 493 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 NUAK2Q9H093 628 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 NKX1-2Q9UD57 310 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 LUC7L2Q9Y383 392 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 CDY1Q9Y6F8 540 aa3.36□□□□□ -1.87
ECHDC1-219ENST00000526299 A0A087WYN8 130 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ZNF814B7Z6K7 855 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 CTIFO43310 598 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ZC3H11AO75152 810 aaKnown RBP eCLIP3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 EPN2O95208 641 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 PLAUP00749 431 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 HGFP14210 728 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 NPR1P16066 1061 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ARRB2P32121 409 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 MCM5P33992 734 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ALDH7A1P49419 539 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ARFIP2P53365 341 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ITGA8P53708 1063 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 RAB1AP62820 205 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 PPATQ06203 517 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 NFATC4Q14934 902 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 FAM57BQ71RH2 274 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ZNF329Q86UD4 541 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 CUZD1Q86UP6 607 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 C11orf44Q8N8P7 122 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 TMEM255BQ8WV15 326 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 NUDCD2Q8WVJ2 157 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 KBTBD7Q8WVZ9 684 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 WDYHV1Q96HA8 205 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 KAZALD1Q96I82 304 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 HIC2Q96JB3 615 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 NT5C1BQ96P26 610 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ASPSCR1Q9BZE9 553 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 MYLK2Q9H1R3 596 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 XPNPEP3Q9NQH7 507 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 GJB4Q9NTQ9 266 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ARL8BQ9NVJ2 186 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 SELENONQ9NZV5 590 aa3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 ERRFI1Q9UJM3 462 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 SIRT4Q9Y6E7 314 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-219ENST00000526299 A0A1W2PPC1 479 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 A0A1W2PPL8 197 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 FOXN3O00409 490 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 HILS1P60008 231 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 RAB32Q13637 225 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 INSCQ1MX18 579 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 ATAT1Q5SQI0 421 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 TMEM240Q5SV17 173 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 RFX8Q6ZV50 586 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 FOXP4Q8IVH2 680 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 NEUROG1Q92886 237 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 SLITRK1Q96PX8 696 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 ARHGAP39Q9C0H5 1083 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 MLXIPLQ9NP71 852 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 FZD4Q9ULV1 537 aa3.34□□□□□ -1.87
ECHDC1-219ENST00000526299 NOTCH3Q9UM47 2321 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 EVPLQ92817 2033 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 RRHO14718 337 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 CD3EAPO15446 510 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 GRID2O43424 1007 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 AP1G1O43747 822 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 FGF3P11487 239 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 HOXB2P14652 356 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 CD19P15391 556 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 VCAM1P19320 739 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 NCLP19338 710 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 HOXA11P31270 313 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 PGDP52209 483 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 PGGT1BP53609 377 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 GPC5P78333 572 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms