RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 SPHK2Q9NRA0 654 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 RXFP3Q9NSD7 469 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.71□□□□□ -0.37
SSBP3-210ENST00000525990 COMMD8Q9NX08 183 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 HCN2Q9UL51 889 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 CACNA1AO00555 2505 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 CCDC163A0A0D9SF12 145 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-210ENST00000525990 DCDC2BA2VCK2 349 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 SLC16A3O15427 465 aaKnown RBP12.7□□□□□ -0.38
SSBP3-210ENST00000525990 ADAM23O75077 832 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 TULP3O75386 442 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 SMC2O95347 1197 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 KLF8O95600 359 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-210ENST00000525990 APBB3O95704 486 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 ADH1CP00326 375 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 RARGP13631 454 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 KIR2DL1P43626 348 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-210ENST00000525990 DGKEP52429 567 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 FKBP3Q00688 224 aaKnown RBP12.7□□□□□ -0.38
SSBP3-210ENST00000525990 ANO4Q32M45 955 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 ANO7Q6IWH7 933 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 KLHL10Q6JEL2 608 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 TPGS1Q6ZTW0 290 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 FRMD1Q8N878 549 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 TXNDC5Q8NBS9 432 aaKnown RBP12.7□□□□□ -0.38
SSBP3-210ENST00000525990 CCDC150Q8NCX0 1101 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 MDGA1Q8NFP4 955 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 KAT5Q92993 513 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 BHMTQ93088 406 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 ACDQ96AP0 544 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 CCDC34Q96HJ3 373 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 TMEM176AQ96HP8 235 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 TIGD1Q96MW7 591 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 TSG101Q99816 390 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 DUSP15Q9H1R2 295 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-210ENST00000525990 TBC1D14Q9P2M4 693 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 NAGPAQ9UK23 515 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 MMP17Q9ULZ9 603 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 COQ4Q9Y3A0 265 aa12.7□□□□□ -0.38
SSBP3-210ENST00000525990 NEDD8-MDP1E9PL57 170 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 HOXC11O43248 304 aaPredicted RBP12.69□□□□□ -0.38
SSBP3-210ENST00000525990 APODP05090 189 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 BCKDHBP21953 392 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 ATP5C1P36542 298 aaKnown RBP12.69□□□□□ -0.38
SSBP3-210ENST00000525990 EIF2DP41214 584 aaKnown RBP12.69□□□□□ -0.38
SSBP3-210ENST00000525990 LMNB2Q03252 620 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 GAD2Q05329 585 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 LRRC63Q05C16 580 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 CUL2Q13617 745 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 CRY1Q16526 586 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 CSRP2Q16527 193 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 GOLGA7BQ2TAP0 167 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 PLK5Q496M5 336 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 TCEAL6Q6IPX3 200 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 TTI2Q6NXR4 508 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 TOGARAM2Q6ZUX3 1019 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 HTR3DQ70Z44 454 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 CACNA2D4Q7Z3S7 1137 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 PIGZQ86VD9 579 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 MIB1Q86YT6 1006 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 GPR161Q8N6U8 529 aaKnown RBP12.69□□□□□ -0.38
SSBP3-210ENST00000525990 UBR7Q8N806 425 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 KIAA1958Q8N8K9 716 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 TSTD1Q8NFU3 115 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 TCEAL3Q969E4 200 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 EXOC4Q96A65 974 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 PNPLA8Q9NP80 782 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 PLK2Q9NYY3 685 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 ARMCX3Q9UH62 379 aaPredicted RBP12.69□□□□□ -0.38
SSBP3-210ENST00000525990 CDV3Q9UKY7 258 aaKnown RBP12.69□□□□□ -0.38
SSBP3-210ENST00000525990 CTNND2Q9UQB3 1225 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 USP3Q9Y6I4 520 aa12.69□□□□□ -0.38
SSBP3-210ENST00000525990 PPP1R3GB7ZBB8 358 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 STX10O60499 249 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 STC2O76061 302 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 EPN2O95208 641 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 KLKB1P03952 638 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 HMBSP08397 361 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 GRIA2P42262 883 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 WASP42768 502 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 FMO5P49326 533 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 STX17P56962 302 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 PDE4CQ08493 712 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 RAB41Q5JT25 222 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 ARHGAP17Q68EM7 881 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 Q6ZNB5 142 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 BHLHA9Q7RTU4 235 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 UBA3Q8TBC4 463 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 RLN3Q8WXF3 142 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 OTUB2Q96DC9 234 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 ACOX2Q99424 681 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 BBS2Q9BXC9 721 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 EBF1Q9UH73 591 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 RASAL2Q9UJF2 1139 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 TSPAN16Q9UKR8 245 aa12.68□□□□□ -0.38
SSBP3-210ENST00000525990 MUC22E2RYF6 1773 aaPredicted RBP12.67□□□□□ -0.38
SSBP3-210ENST00000525990 A0A0A0MRY4 1105 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms