RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TFAP2BQ92481 460 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 CXorf36Q9H7Y0 433 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 HEYLQ9NQ87 328 aaPredicted RBP4.58□□□□□ -1.68
CD44-219ENST00000525685 XPNPEP3Q9NQH7 507 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 MAGED2Q9UNF1 606 aaPredicted RBP4.58□□□□□ -1.68
CD44-219ENST00000525685 USP22Q9UPT9 525 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 CDY1Q9Y6F8 540 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 COMMD10Q9Y6G5 202 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 TET3O43151 1660 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 ZNF142P52746 1687 aaPredicted RBP4.57□□□□□ -1.68
CD44-219ENST00000525685 IQGAP3Q86VI3 1631 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 SPATA31D1Q6ZQQ2 1576 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 EFCAB6Q5THR3 1501 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 LMTK3Q96Q04 1460 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 HFM1A2PYH4 1435 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 NAIPQ13075 1403 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 SLC16A3O15427 465 aaKnown RBP4.57□□□□□ -1.68
CD44-219ENST00000525685 MPPED1O15442 326 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 SNX2O60749 519 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 RHOP08100 348 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 SETSIPP0DME0 302 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 TSHRP16473 764 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 FGFR2P21802 821 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 KCNA3P22001 575 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 ADORA2AP29274 412 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 PMS2P11Q13670 270 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 CCNIQ14094 377 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 PTPRRQ15256 657 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 NBPF8Q3BBV2 869 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 PTCHD3Q3KNS1 767 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 PLAC9Q5JTB6 97 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 CERCAMQ5T4B2 595 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 PLAG1Q6DJT9 500 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 KCTD20Q7Z5Y7 419 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 MYLK4Q86YV6 388 aaPredicted RBP4.57□□□□□ -1.68
CD44-219ENST00000525685 SYTL1Q8IYJ3 562 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 VPS37AQ8NEZ2 397 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 DEPTORQ8TB45 409 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 PSMD1Q99460 953 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 ALG8Q9BVK2 526 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 EIF2AQ9BY44 585 aaKnown RBP4.57□□□□□ -1.68
CD44-219ENST00000525685 DHX36Q9H2U1 1008 aaKnown RBP4.57□□□□□ -1.68
CD44-219ENST00000525685 IL17RBQ9NRM6 502 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 KLC4Q9NSK0 619 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 GJB4Q9NTQ9 266 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 EHD3Q9NZN3 535 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 PCDHGB2Q9Y5G2 931 aa4.57□□□□□ -1.68
CD44-219ENST00000525685 CEP170BQ9Y4F5 1589 aaPredicted RBP4.57□□□□□ -1.68
CD44-219ENST00000525685 ERVK-7P63135 1459 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 NPATQ14207 1427 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 CCDC151A5D8V7 595 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 RRP9O43818 475 aaKnown RBP4.56□□□□□ -1.68
CD44-219ENST00000525685 PROP1O75360 226 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 RBMXL2O75526 392 aaKnown RBP4.56□□□□□ -1.68
CD44-219ENST00000525685 NXPH3O95157 252 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 IL1R1P14778 569 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ZFXP17010 805 aaPredicted RBP4.56□□□□□ -1.68
CD44-219ENST00000525685 NDUFB7P17568 137 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ABCB4P21439 1286 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 GRIA3P42263 894 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 TECP42680 631 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 TM4SF4P48230 202 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 BMPR2Q13873 1038 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 STARD3Q14849 445 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ZIK1Q3SY52 487 aaPredicted RBP4.56□□□□□ -1.68
CD44-219ENST00000525685 FAM153CQ494X1 144 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 TREML2Q5T2D2 321 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ZKSCAN2Q63HK3 967 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 XRRA1Q6P2D8 792 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 MZT2AQ6P582 158 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 PEG10Q86TG7 708 aaKnown RBP4.56□□□□□ -1.68
CD44-219ENST00000525685 LRRC71Q8N4P6 559 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ZNF384Q8TF68 577 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 BRI3BPQ8WY22 251 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ATG4AQ8WYN0 398 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 GLG1Q92896 1179 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 R3HDM4Q96D70 268 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ZC3H10Q96K80 434 aaKnown RBP4.56□□□□□ -1.68
CD44-219ENST00000525685 SGCZQ96LD1 299 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 UROC1Q96N76 676 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 COLEC11Q9BWP8 271 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ZCWPW1Q9H0M4 648 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 FAM83DQ9H4H8 585 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ASB6Q9NWX5 421 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 FNIP2Q9P278 1114 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 MYO1AQ9UBC5 1043 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ARPP21Q9UBL0 812 aaPredicted RBP4.56□□□□□ -1.68
CD44-219ENST00000525685 SSX2IPQ9Y2D8 614 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 MAN2B2Q9Y2E5 1009 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 FRMD4BQ9Y2L6 1034 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ENTPD2Q9Y5L3 495 aa4.56□□□□□ -1.68
CD44-219ENST00000525685 ARHGAP31Q2M1Z3 1444 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 UHRF1BP1Q6BDS2 1440 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 E9PCH4 1651 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 A1L4Q6 167 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 WDR27A2RRH5 827 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 ADM5C9JUS6 153 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 F5H423 210 aaPredicted RBP4.55□□□□□ -1.68
CD44-219ENST00000525685 AREL1O15033 823 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 CCNT2O60583 730 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms