RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 MEA1Q16626 185 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 HECTD3Q5T447 861 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 TRIM65Q6PJ69 517 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 SASS6Q6UVJ0 657 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 LONP2Q86WA8 852 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 ADGRG2Q8IZP9 1017 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 PPM1KQ8N3J5 372 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 ANKRD52Q8NB46 1076 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 INTS2Q9H0H0 1204 aaKnown RBP11.03□□□□□ -0.64
RBBP4-216ENST00000525506 PARD6AQ9NPB6 346 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 SLC8A2Q9UPR5 921 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 THADAQ6YHU6 1953 aa11.03□□□□□ -0.64
RBBP4-216ENST00000525506 CYP26A1O43174 497 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 TBX18O95935 607 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 VDRP11473 427 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 ACO1P21399 889 aaKnown RBP11.02□□□□□ -0.65
RBBP4-216ENST00000525506 TGM1P22735 817 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 MTIF2P46199 727 aaKnown RBP11.02□□□□□ -0.65
RBBP4-216ENST00000525506 PSEN1P49768 467 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 ZNF132P52740 706 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 BCAT1P54687 386 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 EXOC3L4Q17RC7 722 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 SGO2Q562F6 1265 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 PPP1R26Q5T8A7 1209 aaPredicted RBP11.02□□□□□ -0.65
RBBP4-216ENST00000525506 KLHDC10Q6PID8 442 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 RHBDF2Q6PJF5 856 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 GBP6Q6ZN66 633 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 CCDC186Q7Z3E2 898 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 WDR5BQ86VZ2 330 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 C12orf40Q86WS4 652 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 DDX42Q86XP3 938 aaKnown RBP eCLIP11.02□□□□□ -0.65
RBBP4-216ENST00000525506 ZNF276Q8N554 614 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 HEXIM2Q96MH2 286 aaKnown RBP11.02□□□□□ -0.65
RBBP4-216ENST00000525506 OSER1Q9NX31 292 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 APEX2Q9UBZ4 518 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 GMEB2Q9UKD1 530 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 NUDT5Q9UKK9 219 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 RAB23Q9ULC3 237 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 USP18Q9UMW8 372 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 SCML2Q9UQR0 700 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 NFE2L3Q9Y4A8 694 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 USP3Q9Y6I4 520 aa11.02□□□□□ -0.65
RBBP4-216ENST00000525506 NUP205Q92621 2012 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 K7EQS6 105 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 O00370 1275 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 MDM4O15151 490 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 ATG13O75143 517 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 SETSIPP0DME0 302 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 KIF11P52732 1056 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 BST2Q10589 180 aaKnown RBP11.01□□□□□ -0.65
RBBP4-216ENST00000525506 RSPO4Q2I0M5 234 aaPredicted RBP11.01□□□□□ -0.65
RBBP4-216ENST00000525506 KLHL40Q2TBA0 621 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 FBXO43Q4G163 708 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 VWA3BQ502W6 1294 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 C2orf27AQ580R0 203 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 TCP11X2Q5H9J9 407 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 RAB41Q5JT25 222 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 LY6G5CQ5SRR4 150 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 CDKAL1Q5VV42 579 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 LAIR1Q6GTX8 287 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 TMEM270Q6UE05 265 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 LCLAT1Q6UWP7 414 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 CEP68Q76N32 757 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 BBS7Q8IWZ6 715 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 CCDC33Q8N5R6 958 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 FAM160A2Q8N612 972 aaPredicted RBP11.01□□□□□ -0.65
RBBP4-216ENST00000525506 NAT16Q8N8M0 369 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 SECISBP2LQ93073 1101 aaKnown RBP11.01□□□□□ -0.65
RBBP4-216ENST00000525506 CDK5RAP1Q96SZ6 601 aaKnown RBP11.01□□□□□ -0.65
RBBP4-216ENST00000525506 TUBGCP2Q9BSJ2 902 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 NAT10Q9H0A0 1025 aaKnown RBP11.01□□□□□ -0.65
RBBP4-216ENST00000525506 NDST4Q9H3R1 872 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 NMUR1Q9HB89 426 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 ZDHHC4Q9NPG8 344 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 CYLDQ9NQC7 956 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 TLR8Q9NR97 1041 aaKnown RBP11.01□□□□□ -0.65
RBBP4-216ENST00000525506 SH3BP1Q9Y3L3 701 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 DAAM1Q9Y4D1 1078 aa11.01□□□□□ -0.65
RBBP4-216ENST00000525506 CEP192Q8TEP8 1941 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 A0A1W2PQH9 124 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 E2F8A0AVK6 867 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 KCNJ18B7U540 433 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 SLC9A3R1O14745 358 aaPredicted RBP11□□□□□ -0.65
RBBP4-216ENST00000525506 XPO1O14980 1071 aaKnown RBP11□□□□□ -0.65
RBBP4-216ENST00000525506 TLR5O60602 858 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 LETM1O95202 739 aaPredicted RBP11□□□□□ -0.65
RBBP4-216ENST00000525506 HOXA6P31267 233 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 PLA2G4AP47712 749 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 MFAP3P55082 362 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 MYL5Q02045 173 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 KDSRQ06136 332 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 LRMPQ12912 555 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 KCNJ12Q14500 433 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 DMC1Q14565 340 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 CCDC6Q16204 474 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 PKDCCQ504Y2 493 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 MIIPQ5JXC2 388 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 EMC10Q5UCC4 262 aa11□□□□□ -0.65
RBBP4-216ENST00000525506 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11□□□□□ -0.65
RBBP4-216ENST00000525506 TADA2BQ86TJ2 420 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms