RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 PAGE5Q96GU1 130 aa10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 ZFRQ96KR1 1074 aaKnown RBP10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 KCNK16Q96T55 309 aa10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 CGRRF1Q99675 332 aa10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 GTPBP2Q9BX10 602 aaKnown RBP10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 CCSER2Q9H7U1 834 aa10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 FSCN3Q9NQT6 498 aa10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 AGPAT3Q9NRZ7 376 aa10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 NXF1Q9UBU9 619 aaKnown RBP10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 PILRBQ9UKJ0 227 aa10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 KLK13Q9UKR3 277 aa10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 FASNP49327 2511 aaKnown RBP10.15□□□□□ -0.78
TRAPPC4-206ENST00000525303 NUMA1Q14980 2115 aa10.15□□□□□ -0.79
TRAPPC4-206ENST00000525303 GOLGA4Q13439 2230 aaKnown RBP10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 CABIN1Q9Y6J0 2220 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 CELSR3Q9NYQ7 3312 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 SPAARA0A1B0GVQ0 90 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 SRRM3A6NNA2 597 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 CLIC2O15247 247 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 HOXC11O43248 304 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 TGFB1I1O43294 461 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 AP5Z1O43299 807 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 FAM163BP0C2L3 166 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 HOXB2P14652 356 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 GABRG2P18507 467 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 WASP42768 502 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 ATXN3P54252 364 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 MYL6P60660 151 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 SIM1P81133 766 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 CYP24A1Q07973 514 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 SEMA3BQ13214 749 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 TRPC3Q13507 836 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 PSMD6Q15008 389 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 C10orf76Q5T2E6 689 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 PEAR1Q5VY43 1037 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 BTBD8Q5XKL5 378 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 EPM2AIP1Q7L775 607 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 TRMT11Q7Z4G4 463 aaKnown RBP10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 PIP4P1Q86T03 277 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 TMEM25Q86YD3 366 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 BBS7Q8IWZ6 715 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 XXYLT1Q8NBI6 393 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 SCAMP5Q8TAC9 235 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 ZNF507Q8TCN5 953 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 ZNF516Q92618 1163 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 WBP2Q969T9 261 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 MED10Q9BTT4 135 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 GZF1Q9H116 711 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 SMYD3Q9H7B4 428 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 SPHK2Q9NRA0 654 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 RMND1Q9NWS8 449 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 CALCOCO1Q9P1Z2 691 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 DEC1Q9P2X7 70 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 SLC6A14Q9UN76 642 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 NEUROG3Q9Y4Z2 214 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 ACACAQ13085 2346 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 ITPR1Q14643 2758 aa10.14□□□□□ -0.79
TRAPPC4-206ENST00000525303 ATP8B3O60423 1300 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 UPK3BL1B0FP48 263 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 UPK3BL2E5RIL1 263 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 TRIM24O15164 1050 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 CLSTN1O94985 981 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 KIF20AO95235 890 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 STAU1O95793 577 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 IRF1P10914 325 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 HOXB3P14651 431 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 NTSR1P30989 418 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 ATICP31939 592 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 HOXD12P35452 270 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 TUBP50607 506 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 SLC5A3P53794 718 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 CDH8P55286 799 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 GFPT1Q06210 699 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 ZNF33AQ06730 810 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 COL9A2Q14055 689 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 DUOXA1Q1HG43 343 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 PREPLQ4J6C6 727 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 FAM26FQ5R3K3 315 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 SNX30Q5VWJ9 437 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 EGFLAMQ63HQ2 1017 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 SLC36A4Q6YBV0 504 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 NUDT18Q6ZVK8 323 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 PAQR9Q6ZVX9 377 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 FAM35AQ86V20 835 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 MIB1Q86YT6 1006 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 NELFCDQ8IXH7 590 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 HDDC3Q8N4P3 179 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 TERB1Q8NA31 727 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 OR2I1PQ8NGU4 316 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 CEP76Q8TAP6 659 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 KCNV2Q8TDN2 545 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 SYAP1Q96A49 352 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 ERLEC1Q96DZ1 483 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 NACA2Q9H009 215 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 XYLT2Q9H1B5 865 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 CAPN10Q9HC96 672 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 DMAP1Q9NPF5 467 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 EXOC1Q9NV70 894 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 GMIPQ9P107 970 aa10.13□□□□□ -0.79
TRAPPC4-206ENST00000525303 HCN2Q9UL51 889 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms