RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 ARMCX6Q7L4S7 300 aa18.12■□□□□ 0.49
TSKU-202ENST00000525167 NAT16Q8N8M0 369 aa18.12■□□□□ 0.49
TSKU-202ENST00000525167 KDF1Q8NAX2 398 aaPredicted RBP18.12■□□□□ 0.49
TSKU-202ENST00000525167 SLC2A14Q8TDB8 520 aa18.12■□□□□ 0.49
TSKU-202ENST00000525167 TMC2Q8TDI7 906 aa18.12■□□□□ 0.49
TSKU-202ENST00000525167 XPO6Q96QU8 1125 aaKnown RBP18.12■□□□□ 0.49
TSKU-202ENST00000525167 BACH2Q9BYV9 841 aa18.12■□□□□ 0.49
TSKU-202ENST00000525167 ADAM33Q9BZ11 813 aa18.12■□□□□ 0.49
TSKU-202ENST00000525167 PNPLA8Q9NP80 782 aa18.12■□□□□ 0.49
TSKU-202ENST00000525167 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.12■□□□□ 0.493e-18■■■■■ 409.9
TSKU-202ENST00000525167 TMEM74BQ9NUR3 256 aa18.12■□□□□ 0.49
TSKU-202ENST00000525167 WDR35Q9P2L0 1181 aa18.12■□□□□ 0.49
TSKU-202ENST00000525167 LSM7Q9UK45 103 aaKnown RBP18.12■□□□□ 0.49
TSKU-202ENST00000525167 PDXKO00764 312 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 GREM1O60565 184 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 ASS1P00966 412 aaKnown RBP18.11■□□□□ 0.49
TSKU-202ENST00000525167 SLFN14P0C7P3 912 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 FAM200BP0CF97 657 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 GABRG2P18507 467 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 ATP5C1P36542 298 aaKnown RBP18.11■□□□□ 0.49
TSKU-202ENST00000525167 RPL6Q02878 288 aaKnown RBP18.11■□□□□ 0.49
TSKU-202ENST00000525167 DUOXA1Q1HG43 343 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 GRAMD4Q6IC98 578 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 SDE2Q6IQ49 451 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 FRMD1Q8N878 549 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 KLF16Q9BXK1 252 aaPredicted RBP18.11■□□□□ 0.49
TSKU-202ENST00000525167 KCTD10Q9H3F6 313 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 ZDHHC4Q9NPG8 344 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 EXOC1Q9NV70 894 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 DNAJC17Q9NVM6 304 aaKnown RBP18.11■□□□□ 0.49
TSKU-202ENST00000525167 CALCOCO1Q9P1Z2 691 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 PCDHA7Q9UN72 937 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 SLC6A14Q9UN76 642 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 SCML2Q9UQR0 700 aa18.11■□□□□ 0.49
TSKU-202ENST00000525167 MYOFQ9NZM1 2061 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 A0A1W2PQF6 199 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 C1QTNF9BB2RNN3 333 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 KLRC4O43908 158 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 BEST1O76090 585 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 MYL1P05976 194 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 SERPINF2P08697 491 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 C1QTNF9P0C862 333 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 ZSCAN22P10073 491 aaPredicted RBP18.1■□□□□ 0.49
TSKU-202ENST00000525167 IRF1P10914 325 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 CCDC130P13994 396 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 ITPKAP23677 461 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 NDST1P52848 882 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 MAP3K7CLP57077 242 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 SEMA3BQ13214 749 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 PIP4P1Q86T03 277 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 KIAA0895Q8NCT3 520 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 DEFB124Q8NES8 71 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 HNRNPABQ99729 332 aaKnown RBP18.1■□□□□ 0.49
TSKU-202ENST00000525167 GABRG3Q99928 467 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 BBS2Q9BXC9 721 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 TMEM121BQ9BXQ6 578 aaPredicted RBP18.1■□□□□ 0.49
TSKU-202ENST00000525167 CFAP45Q9UL16 551 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 PCDHA5Q9Y5H7 936 aa18.1■□□□□ 0.49
TSKU-202ENST00000525167 NEDD8-MDP1E9PL57 170 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 GFRA2O00451 464 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 MAPK13O15264 365 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 NR3C1P04150 777 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 CFIP05156 583 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 TYRP14679 529 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 ASPAP45381 313 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 MAPK8P45983 427 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 ATXN3P54252 364 aaPredicted RBP18.09■□□□□ 0.49
TSKU-202ENST00000525167 DLG4P78352 724 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 GFPT1Q06210 699 aaPredicted RBP18.09■□□□□ 0.49
TSKU-202ENST00000525167 INCA1Q0VD86 236 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 STK4Q13043 487 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 SV2AQ7L0J3 742 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 CHPFQ8IZ52 775 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 HDDC3Q8N4P3 179 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 SNX21Q969T3 373 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 WBP2Q969T9 261 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 DNAI2Q9GZS0 605 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 CAPN10Q9HC96 672 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 CD248Q9HCU0 757 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 HCN2Q9UL51 889 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 FRMD4BQ9Y2L6 1034 aa18.09■□□□□ 0.49
TSKU-202ENST00000525167 ATXN2Q99700 1313 aaKnown RBP18.08■□□□□ 0.49
TSKU-202ENST00000525167 IGHV1OR15-9A0A0B4J2B8 117 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 F13A1P00488 732 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 PGFP49763 221 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 PSEN1P49768 467 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 ZNF33AQ06730 810 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 ENPEPQ07075 957 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 EGFLAMQ63HQ2 1017 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 CLEC20AQ6ZU45 233 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 TADA2BQ86TJ2 420 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 MIB1Q86YT6 1006 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 ZNF276Q8N554 614 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 C12orf29Q8N999 325 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 IPO4Q8TEX9 1081 aaKnown RBP18.08■□□□□ 0.48
TSKU-202ENST00000525167 GATA6Q92908 595 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 SCNM1Q9BWG6 230 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 IMPG2Q9BZV3 1241 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 CYP3A43Q9HB55 503 aa18.08■□□□□ 0.48
TSKU-202ENST00000525167 FAM49BQ9NUQ9 324 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms