RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 NDST1P52848 882 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 NRLP54845 237 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 BCAR1P56945 870 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 RBP5P82980 135 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 ZBTB16Q05516 673 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 MTM1Q13496 603 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 DBN1Q16643 649 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 CDO1Q16878 200 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 C15orf59Q2T9L4 293 aaPredicted RBP9.27□□□□□ -0.93
PKP3-202ENST00000524646 TSNAXIP1Q2TAA8 658 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 PLEKHG4Q58EX7 1191 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 OLFML1Q6UWY5 402 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.27□□□□□ -0.93
PKP3-202ENST00000524646 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 PQLC3Q8N755 202 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 PPM1NQ8N819 430 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 UBA3Q8TBC4 463 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 RAB3IL1Q8TBN0 382 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 MTBPQ96DY7 904 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 PIWIL1Q96J94 861 aaKnown RBP9.27□□□□□ -0.93
PKP3-202ENST00000524646 HEXIM2Q96MH2 286 aaKnown RBP9.27□□□□□ -0.93
PKP3-202ENST00000524646 C7orf26Q96N11 449 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 QKIQ96PU8 341 aaKnown RBP eCLIP9.27□□□□□ -0.93
PKP3-202ENST00000524646 SRPK1Q96SB4 655 aaKnown RBP9.27□□□□□ -0.93
PKP3-202ENST00000524646 MMP19Q99542 508 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 NT5C1AQ9BXI3 368 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 C12orf65Q9H3J6 166 aaKnown RBP9.27□□□□□ -0.93
PKP3-202ENST00000524646 MMADHCQ9H3L0 296 aaPredicted RBP9.27□□□□□ -0.93
PKP3-202ENST00000524646 USP29Q9HBJ7 922 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 NGRNQ9NPE2 291 aaKnown RBP9.27□□□□□ -0.93
PKP3-202ENST00000524646 GPATCH2LQ9NWQ4 482 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 HEY2Q9UBP5 337 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 ZC3H7BQ9UGR2 993 aaKnown RBP9.27□□□□□ -0.93
PKP3-202ENST00000524646 NUMBLQ9Y6R0 609 aa9.27□□□□□ -0.93
PKP3-202ENST00000524646 FAM159BA6NKW6 160 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 FCHO1O14526 889 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 TRDMT1O14717 391 aaKnown RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 PIAS1O75925 651 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 TOMM70O94826 608 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 APOEP02649 317 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 DLDP09622 509 aaKnown RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 NEFHP12036 1026 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 ACADSP16219 412 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 RBL1P28749 1068 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 SERPINB3P29508 390 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 SDC4P31431 198 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 SCNN1AP37088 669 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 PTPN9P43378 593 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 BLMHQ13867 455 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 PRKG1Q13976 671 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 TTLL4Q14679 1199 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 KCTD2Q14681 263 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 SLC10A6Q3KNW5 377 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 CCDC14Q49A88 953 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 TEX44Q53QW1 395 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 RAB6CQ53S08 254 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 BOLA3Q53S33 107 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 SH3PXD2AQ5TCZ1 1133 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 LGSNQ5TDP6 509 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 FAXCQ5TGI0 409 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 MAP1SQ66K74 1059 aaPredicted RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 ATG16L1Q676U5 607 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 C4orf50Q6ZRC1 276 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 ZNF534Q76KX8 674 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 PRPF39Q86UA1 669 aaKnown RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 CAND1Q86VP6 1230 aaKnown RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 LRRC6Q86X45 466 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 CTAGE3PQ8IX95 158 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 VPS52Q8N1B4 723 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 ARHGAP24Q8N264 748 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 PCDH19Q8TAB3 1148 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 TTC8Q8TAM2 541 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 GSDMBQ8TAX9 411 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 FAM172AQ8WUF8 416 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 CNKSR2Q8WXI2 1034 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 COPS5Q92905 334 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 OXNAD1Q96HP4 312 aaPredicted RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 NSL1Q96IY1 281 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 BTBD10Q9BSF8 475 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 CADM1Q9BY67 442 aaKnown RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 RAB6CQ9H0N0 254 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 DENND2DQ9H6A0 471 aaPredicted RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 IFT122Q9HBG6 1241 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 PLAC1Q9HBJ0 212 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 XAB2Q9HCS7 855 aaKnown RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 ALG13Q9NP73 1137 aaKnown RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 DPP3Q9NY33 737 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 KCNK4Q9NYG8 393 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 ERAP1Q9NZ08 941 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 SIRPGQ9P1W8 387 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 MYO18AQ92614 2054 aaKnown RBP9.26□□□□□ -0.93
PKP3-202ENST00000524646 SHROOM3Q8TF72 1996 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 PATJQ8NI35 1801 aa9.26□□□□□ -0.93
PKP3-202ENST00000524646 MYLKQ15746 1914 aa9.25□□□□□ -0.93
PKP3-202ENST00000524646 A0A087WZ62 844 aa9.25□□□□□ -0.93
PKP3-202ENST00000524646 TSPAN1O60635 241 aa9.25□□□□□ -0.93
PKP3-202ENST00000524646 SMNDC1O75940 238 aaKnown RBP eCLIP9.25□□□□□ -0.93
PKP3-202ENST00000524646 KRT38O76015 456 aa9.25□□□□□ -0.93
PKP3-202ENST00000524646 LGALS2P05162 132 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms