RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 LGMNQ99538 433 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 CCDC77Q9BR77 488 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 AAASQ9NRG9 546 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 ETNK2Q9NVF9 386 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 NINJ2Q9NZG7 142 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 NFS1Q9Y697 457 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 APOL1O14791 398 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 SOAT2O75908 522 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 CYP2F1P24903 491 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 ARL4AP40617 200 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 SNX16P57768 344 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 LPIN1Q14693 890 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 C3orf62Q6ZUJ4 267 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 GPRIN1Q7Z2K8 1008 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 SERINC5Q86VE9 423 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 METTL23Q86XA0 190 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 TP53INP2Q8IXH6 220 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 SCLYQ96I15 445 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 RUNDC3BQ96NL0 473 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 SH3GL2Q99962 352 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 TSPYL1Q9H0U9 437 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 ALG13Q9NP73 1137 aaKnown RBP12.24□□□□□ -0.45
PTPRK-216ENST00000524481 CRTAC1Q9NQ79 661 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 INTS9Q9NV88 658 aaKnown RBP12.24□□□□□ -0.45
PTPRK-216ENST00000524481 CWC15Q9P013 229 aaKnown RBP12.24□□□□□ -0.45
PTPRK-216ENST00000524481 ATP8B3O60423 1300 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 TTC4O95801 387 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 INHAP05111 366 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 HMBSP08397 361 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 CHN1P15882 459 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 NPR3P17342 541 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 IVDP26440 423 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 MDH1P40925 334 aaKnown RBP12.24□□□□□ -0.45
PTPRK-216ENST00000524481 CRADDP78560 199 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 PTK6Q13882 451 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 DPYSL3Q14195 570 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 HIF1AQ16665 826 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 ALKAL1Q6UXT8 129 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 MREGQ8N565 214 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 ARFGAP2Q8N6H7 521 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 PCSK9Q8NBP7 692 aaKnown RBP12.24□□□□□ -0.45
PTPRK-216ENST00000524481 DNAI2Q9GZS0 605 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 KIF9Q9HAQ2 790 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 WHRNQ9P202 907 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 ALDH1A1P00352 501 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 HOXD10P28358 340 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 BOLA3Q53S33 107 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 ERMARDQ5T6L9 678 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 GLB1LQ6UWU2 654 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 C10orf67Q8IYJ2 551 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 PCDH19Q8TAB3 1148 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 RNF157Q96PX1 679 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 PRMT1Q99873 361 aaKnown RBP12.24□□□□□ -0.45
PTPRK-216ENST00000524481 SENP6Q9GZR1 1112 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-216ENST00000524481 VRTNQ9H8Y1 702 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 HMX1Q9NP08 348 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-216ENST00000524481 SLC38A7Q9NVC3 462 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 SRRDQ9UH36 339 aa12.24□□□□□ -0.45
PTPRK-216ENST00000524481 MGAMO43451 1857 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 EBAG9O00559 213 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 KIF3CO14782 793 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 ADAMTS4O75173 837 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 TADA2AO75478 443 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 DRG2P55039 364 aaKnown RBP12.23□□□□□ -0.45
PTPRK-216ENST00000524481 TFDP2Q14188 446 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 STILQ15468 1287 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 SEPT7Q16181 437 aaKnown RBP12.23□□□□□ -0.45
PTPRK-216ENST00000524481 ANKRD20A8PQ5CZ79 823 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 OVOS1Q6IE37 1185 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 CLEC20AQ6ZU45 233 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 UNC93AQ86WB7 457 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 CYP4X1Q8N118 509 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 ALLCQ8N6M5 410 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 USP33Q8TEY7 942 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 CELF6Q96J87 481 aaKnown RBP12.23□□□□□ -0.45
PTPRK-216ENST00000524481 DEFB118Q96PH6 123 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 PCDH18Q9HCL0 1135 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 TMEM30AQ9NV96 361 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 UBP1Q9NZI7 540 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 DDX20Q9UHI6 824 aaKnown RBP12.23□□□□□ -0.45
PTPRK-216ENST00000524481 RASA4BC9J798 803 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 SCAMP3O14828 347 aaKnown RBP12.23□□□□□ -0.45
PTPRK-216ENST00000524481 RASA4O43374 803 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 BRAFP15056 766 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTPRK-216ENST00000524481 DDR2Q16832 855 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 SPOUT1Q5T280 376 aaKnown RBP12.23□□□□□ -0.45
PTPRK-216ENST00000524481 C6orf118Q5T5N4 469 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 CENPUQ71F23 418 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 TTC39CQ8N584 583 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 DUSP16Q9BY84 665 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 EPB41L4BQ9H329 900 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 C12orf65Q9H3J6 166 aaKnown RBP12.23□□□□□ -0.45
PTPRK-216ENST00000524481 DNAJB4Q9UDY4 337 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 SLC27A5Q9Y2P5 690 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 RANBP2P49792 3224 aaKnown RBP12.23□□□□□ -0.45
PTPRK-216ENST00000524481 A0A0G2JMZ2 1700 aa12.23□□□□□ -0.45
PTPRK-216ENST00000524481 USP12O75317 370 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 SPARCL1Q14515 664 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms