RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	CAPN9	O14815	690 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	PAPSS1	O43252	624 aa	Predicted RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	CDH16	O75309	829 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	ASGR1	P07306	291 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	PTPN1	P18031	435 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	PAX3	P23760	479 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	ACAT1	P24752	427 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	IVD	P26440	423 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	SOX4	Q06945	474 aa	Predicted RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	TRIM32	Q13049	653 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	PDIA2	Q13087	525 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	TMED2	Q15363	201 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	TAZ	Q16635	292 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	KYNU	Q16719	465 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	CCDC14	Q49A88	953 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	PKDCC	Q504Y2	493 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	ANKRD20A8P	Q5CZ79	823 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	ERMARD	Q5T6L9	678 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	EMC10	Q5UCC4	262 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	WSCD1	Q658N2	575 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	BZW1	Q7L1Q6	419 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	ANKS1B	Q7Z6G8	1248 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	ZC3H18	Q86VM9	953 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	ZBED8	Q8IZ13	594 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	PDIK1L	Q8N165	341 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	URGCP	Q8TCY9	931 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	PAWR	Q96IZ0	340 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	SENP8	Q96LD8	212 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	C9orf72	Q96LT7	481 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	ZFP42	Q96MM3	310 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	RNF157	Q96PX1	679 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	HNRNPAB	Q99729	332 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	TRIM62	Q9BVG3	475 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	DUSP16	Q9BY84	665 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	PHACTR1	Q9C0D0	580 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	ZMYND15	Q9H091	742 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	KLC2	Q9H0B6	622 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	CXCL16	Q9H2A7	254 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	EPB41L4B	Q9H329	900 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	RABEP2	Q9H5N1	569 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	PCDH18	Q9HCL0	1135 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	INTS9	Q9NV88	658 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	GPATCH2L	Q9NWQ4	482 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	DDX43	Q9NXZ2	648 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	DSE	Q9UL01	958 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	INPP5F	Q9Y2H2	1132 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	HEY1	Q9Y5J3	304 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	IKBKG	Q9Y6K9	419 aa		11.21	□□□□□ -0.61
SPIDR-222	ENST00000524006	MYO18A	Q92614	2054 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	MIA3	Q5JRA6	1907 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	ZNF487	B1APH4	448 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	TULP2	O00295	520 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	PITPNM1	O00562	1244 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	PTGES	O14684	152 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	SPTLC1	O15269	473 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	KCNN4	O15554	427 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	AP1G2	O75843	785 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	CD48	P09326	243 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	ZSCAN5DP	P0CG00	497 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	GHR	P10912	638 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	FGFR1	P11362	822 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	ETS1	P14921	441 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	PECAM1	P16284	738 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	CYP2F1	P24903	491 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	STIP1	P31948	543 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	MNX1	P50219	401 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	SCNN1G	P51170	649 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	CACNB2	Q08289	660 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	GRIK3	Q13003	919 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	MMRN1	Q13201	1228 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	PTK7	Q13308	1070 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	KCNA10	Q16322	511 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	KLHL38	Q2WGJ6	581 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	EFHC2	Q5JST6	749 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	ARC	Q7LC44	396 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	STRADA	Q7RTN6	431 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	CPLX4	Q7Z7G2	160 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	NLRP14	Q86W24	1093 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	OSTM1	Q86WC4	334 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	RELL1	Q8IUW5	271 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	THEM5	Q8N1Q8	247 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	ARFGAP1	Q8N6T3	406 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	FAM71D	Q8N9W8	422 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	PYROXD1	Q8WU10	500 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	PRCC	Q92733	491 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	ARHGEF2	Q92974	986 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	FAF2	Q96CS3	445 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	SMARCD1	Q96GM5	515 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	UROC1	Q96N76	676 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	PRDM16	Q9HAZ2	1276 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	KCNK9	Q9NPC2	374 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	XPO7	Q9UIA9	1087 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	CDH9	Q9ULB4	789 aa		11.2	□□□□□ -0.62
SPIDR-222	ENST00000524006	TANC1	Q9C0D5	1861 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006		A0A1W2PPC1	479 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms