RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 MPP7Q5T2T1 576 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 LIPMQ5VYY2 423 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 DGAT2L7PQ6IED9 249 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 CCDC186Q7Z3E2 898 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 PPP1R42Q7Z4L9 355 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 CCDC105Q8IYK2 499 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 ADGRF2Q8IZF7 708 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 ZBTB44Q8NCP5 570 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 ZCCHC10Q8TBK6 192 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 SNX33Q8WV41 574 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 ZFAND2BQ8WV99 257 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 GRAMD1AQ96CP6 724 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 BICD1Q96G01 975 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 RBM17Q96I25 401 aaKnown RBP4.31□□□□□ -1.72
SKP1-209ENST00000522552 FER1L6-AS2Q96M78 137 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 UROC1Q96N76 676 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 GCNAQ96QF7 691 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 JMJD8Q96S16 334 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 PIP5K1AQ99755 562 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 HTATIP2Q9BUP3 242 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 CPEB1Q9BZB8 566 aaKnown RBP4.31□□□□□ -1.72
SKP1-209ENST00000522552 AP5M1Q9H0R1 490 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 ST6GALNAC4Q9H4F1 302 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 BCO1Q9HAY6 547 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 ZBTB26Q9HCK0 441 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 MID1IP1Q9NPA3 183 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 FANCFQ9NPI8 374 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 SEMA4BQ9NPR2 832 aaPredicted RBP4.31□□□□□ -1.72
SKP1-209ENST00000522552 CPSF2Q9P2I0 782 aaKnown RBP4.31□□□□□ -1.72
SKP1-209ENST00000522552 SUCLA2Q9P2R7 463 aaPredicted RBP4.31□□□□□ -1.72
SKP1-209ENST00000522552 DKK4Q9UBT3 224 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 SLC25A10Q9UBX3 287 aaPredicted RBP4.31□□□□□ -1.72
SKP1-209ENST00000522552 SARDHQ9UL12 918 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 KCNE2Q9Y6J6 123 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 LOC102723971A0A1B0GUV8 181 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 CCDC151A5D8V7 595 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 MYO1GB0I1T2 1018 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 C9orf172C9J069 976 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 TMEM232C9JQI7 657 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 MYO1CO00159 1063 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 SGSM2O43147 1006 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 ADCY6O43306 1168 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 PROM1O43490 865 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 GAS2O43903 313 aaKnown RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 TULP3O75386 442 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 RPP40O75818 363 aaKnown RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 C22orf31O95567 290 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 VIPP01282 170 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 LRG1P02750 347 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 GNAI3P08754 354 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 LTA4HP09960 611 aaKnown RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 SBK3P0C264 359 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 MYBL1P10243 752 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 ARP10275 920 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 CPT2P23786 658 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 APEX1P27695 318 aaKnown RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 SLC5A2P31639 672 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 GUCY1A2P33402 732 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 AMPHP49418 695 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 WNT3AP56704 352 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 EIF4A1P60842 406 aaKnown RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 GNAI1P63096 354 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 ARHGEF7Q14155 803 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 NPY5RQ15761 445 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 SMU1Q2TAY7 513 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 SGO2Q562F6 1265 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 SUSD1Q6UWL2 747 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 CRELD2Q6UXH1 353 aaPredicted RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 CCBE1Q6UXH8 406 aaPredicted RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 TMC5Q6UXY8 1006 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 SYNE3Q6ZMZ3 975 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 NFXL1Q6ZNB6 911 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 TMPRSS7Q7RTY8 843 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 ANKRD35Q8N283 1001 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 FBXO18Q8NFZ0 1043 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 OR7D4Q8NG98 312 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 FIBINQ8TAL6 211 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 BICD2Q8TD16 824 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 FAM162AQ96A26 154 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 LENG1Q96BZ8 264 aaPredicted RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 ELP4Q96EB1 424 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 LENG8Q96PV6 779 aaPredicted RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 YIPF2Q9BWQ6 316 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 TEX12Q9BXU0 123 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 INTS2Q9H0H0 1204 aaKnown RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 C1orf21Q9H246 121 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 STN1Q9H668 368 aaKnown RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 PLEKHA2Q9HB19 425 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 SLC39A2Q9NP94 309 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 LTB4R2Q9NPC1 389 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 NRIP3Q9NQ35 241 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 LANCL2Q9NS86 450 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 MARCH4Q9P2E8 410 aaPredicted RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 LIMA1Q9UHB6 759 aaKnown RBP4.3□□□□□ -1.72
SKP1-209ENST00000522552 TRPS1Q9UHF7 1281 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 SLCO3A1Q9UIG8 710 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 DUSP13Q9UII6 198 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 LAMP5Q9UJQ1 280 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 KLHL20Q9Y2M5 609 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 PLEKHM1Q9Y4G2 1056 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms