RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 VPS33BQ9H267 617 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 TRMT13Q9NUP7 481 aaKnown RBP5.09□□□□□ -1.59
CLK4-207ENST00000520909 XPR1Q9UBH6 696 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 ZNF112Q9UJU3 913 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 SQORQ9Y6N5 450 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 LAMC1P11047 1609 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 ALKQ9UM73 1620 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 YTHDC2Q9H6S0 1430 aaKnown RBP5.09□□□□□ -1.59
CLK4-207ENST00000520909 ADGRB1O14514 1584 aa5.09□□□□□ -1.6
CLK4-207ENST00000520909 CEP170BQ9Y4F5 1589 aaPredicted RBP5.09□□□□□ -1.6
CLK4-207ENST00000520909 SETBP1Q9Y6X0 1596 aa5.09□□□□□ -1.6
CLK4-207ENST00000520909 LRPPRCP42704 1394 aaKnown RBP5.09□□□□□ -1.6
CLK4-207ENST00000520909 ABCC11Q96J66 1382 aa5.09□□□□□ -1.6
CLK4-207ENST00000520909 DISP3Q9P2K9 1392 aa5.09□□□□□ -1.6
CLK4-207ENST00000520909 SLIT1O75093 1534 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 MYO3AQ8NEV4 1616 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 FAM90A8PA6NJQ4 464 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 CRYABP02511 175 aaKnown RBP5.08□□□□□ -1.6
CLK4-207ENST00000520909 FAM90A13PP0C7W8 464 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 FAM90A24PP0C7X0 464 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 CYP2C9P11712 490 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 HSPA2P54652 639 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 ZNF91Q05481 1191 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 MYO1EQ12965 1108 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 SEMA3AQ14563 771 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 C9orf47Q6ZRZ4 202 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 USP45Q70EL2 814 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 PIM3Q86V86 326 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 SFTPA1Q8IWL2 248 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 OSR1Q8TAX0 266 aaPredicted RBP5.08□□□□□ -1.6
CLK4-207ENST00000520909 USP35Q9P2H5 1018 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 AMFRQ9UKV5 643 aa5.08□□□□□ -1.6
CLK4-207ENST00000520909 KDM5AP29375 1690 aaKnown RBP5.08□□□□□ -1.6
CLK4-207ENST00000520909 EVC2Q86UK5 1308 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 ANP32CO43423 234 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 RNF8O76064 485 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 CSF1RP07333 972 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 TTC3P53804 2025 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 NPY5RQ15761 445 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 CYP1B1Q16678 543 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 DLK2Q6UY11 383 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 ADAMTS13Q76LX8 1427 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 IZUMO1Q8IYV9 350 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 ABRAQ8N0Z2 381 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 MMS19Q96T76 1030 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 SARS2Q9NP81 518 aaKnown RBP5.07□□□□□ -1.6
CLK4-207ENST00000520909 ASIC5Q9NY37 505 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 TMX2Q9Y320 296 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 IQGAP1P46940 1657 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 ASXL1Q8IXJ9 1541 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 ZMYM2Q9UBW7 1377 aa5.07□□□□□ -1.6
CLK4-207ENST00000520909 MYO1CO00159 1063 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 ZRANB2O95218 330 aaKnown RBP eCLIP5.06□□□□□ -1.6
CLK4-207ENST00000520909 FGAP02671 866 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 PHKG2P15735 406 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 ADORA2AP29274 412 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 ME1P48163 572 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 NANOS2P60321 138 aaKnown RBP5.06□□□□□ -1.6
CLK4-207ENST00000520909 ERV3-1Q14264 604 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 PLS1Q14651 629 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 LY6KQ17RY6 165 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 KHDC1LQ5JSQ8 128 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.06□□□□□ -1.6
CLK4-207ENST00000520909 RSPRY1Q96DX4 576 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 PRR25Q96S07 402 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 CDK19Q9BWU1 502 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 HIPK2Q9H2X6 1198 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 CXorf36Q9H7Y0 433 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 PANK3Q9H999 370 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 PCDHA6Q9UN73 950 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 PLEKHH1Q9ULM0 1364 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 SBNO2Q9Y2G9 1366 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 MED14O60244 1454 aa5.06□□□□□ -1.6
CLK4-207ENST00000520909 NPHP4O75161 1426 aaPredicted RBP5.05□□□□□ -1.6
CLK4-207ENST00000520909 PTPRUQ92729 1446 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 PSMD9O00233 223 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 TLR2O60603 784 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 MT-CO3P00414 261 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 CYP19A1P11511 503 aaPredicted RBP5.05□□□□□ -1.6
CLK4-207ENST00000520909 XRCC6P12956 609 aaKnown RBP eCLIP5.05□□□□□ -1.6
CLK4-207ENST00000520909 NKX6-1P78426 367 aaPredicted RBP5.05□□□□□ -1.6
CLK4-207ENST00000520909 ID2Q02363 134 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 KRT17Q04695 432 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 ZNF280BQ86YH2 543 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 MAP4K1Q92918 833 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 SLC35A4Q96G79 324 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 SLC12A5Q9H2X9 1139 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 TMEM184CQ9NVA4 438 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 NRXN3Q9Y4C0 1643 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 TNKSO95271 1327 aa5.05□□□□□ -1.6
CLK4-207ENST00000520909 CES2O00748 559 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 KATNA1O75449 491 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 THP07101 528 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 POU2F2P09086 479 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 PSG1P11464 419 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 HTR6P50406 440 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 DGKEP52429 567 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 SRSF1Q07955 248 aaKnown RBP eCLIP5.04□□□□□ -1.6
CLK4-207ENST00000520909 PGS1Q32NB8 556 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 MGAT5BQ3V5L5 792 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms